SRSF3 (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000016637 T34740_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rbp1-like
M121_0.6 		Drosophila melanogaster AUCADCR RNAcompete
Ray et al.(2013)
RNCMPT00127 		0.712
Rbp1
M056_0.6 		Drosophila melanogaster WCAACRR RNAcompete
Ray et al.(2013)
RNCMPT00058 		0.712
Rbp1
M336_0.6 		Drosophila melanogaster Sequence logo not available AUCYNNA SELEX
Cook et al.(2011)
804_7664738.1 		0.712
Rbp1
M335_0.6 		Drosophila melanogaster Sequence logo not available DCADCUUUA SELEX
Cook et al.(2011)
804_7664738 		0.712
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000016368 RRM 12 77

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTBP1 Homo sapiens ENSG00000011304 D 0.000
Ame_R002925 Ailuropoda melanoleuca Ame_R002925 I 0.000
ENSPPYG00000001132 Pongo pygmaeus ENSPPYG00000001132 I 0.000
PTBP2 Oryzias latipes ENSORLG00000019191 I 0.000
PTBP2 Oryzias latipes ENSORLG00000013557 I 0.000
PTBP2 Oryctolagus cuniculus ENSOCUG00000017608 I 0.000
PTBP2 Ornithorhynchus anatinus ENSOANG00000004656 I 0.000
Ptbp2 Mus musculus ENSMUSG00000028134 I 0.000
PTBP1 Monodelphis domestica ENSMODG00000006302 I 0.000
PTBP2 Monodelphis domestica ENSMODG00000004211 I 0.000
ENSPPYG00000009289 Pongo pygmaeus ENSPPYG00000009289 I 0.000
PTBP2 Pan troglodytes ENSPTRG00000000987 I 0.000
XR_025154.1 Pan troglodytes ENSPTRG00000010165 I 0.000
PTBP2 Vicugna pacos ENSVPAG00000002841 I 0.000
PTBP2 Tursiops truncatus ENSTTRG00000012904 I 0.000
PTBP2 Tarsius syrichta ENSTSYG00000002576 I 0.000
PTBP2 Tetraodon nigroviridis ENSTNIG00000018950 I 0.000
PTBP2 Taeniopygia guttata ENSTGUG00000005558 I 0.000
PTBP1 Taeniopygia guttata ENSTGUG00000000641 I 0.000
PTBP1 Sus scrofa ENSSSCG00000013421 I 0.000
Ptbp2 Rattus norvegicus ENSRNOG00000010827 I 0.000
PTBP1 Macaca mulatta ENSMMUG00000016450 I 0.000
PTBP2 Macaca mulatta ENSMMUG00000016130 I 0.000
PTBP2 Gasterosteus aculeatus ENSGACG00000000940 I 0.000
PTBP2 Homo sapiens ENSG00000117569 I 0.000
LOC100057336 Equus caballus ENSECAG00000015783 I 0.000
PTBP2 Danio rerio ENSDARG00000015901 I 0.000
PTBP2 Cavia porcellus ENSCPOG00000003762 I 0.000
PTBP1 Callithrix jacchus ENSCJAG00000020162 I 0.000
PTBP2 Canis familiaris ENSCAFG00000020080 I 0.000
PTBP1 Canis familiaris ENSCAFG00000019693 I 0.000
PTBP2 Gasterosteus aculeatus ENSGACG00000014892 I 0.000
Q5F456_CHICK Gallus gallus ENSGALG00000001962 I 0.000
PTBP2 Myotis lucifugus ENSMLUG00000002522 I 0.000
PTBP2 Microcebus murinus ENSMICG00000008543 I 0.000
PTBP2 Meleagris gallopavo ENSMGAG00000007308 I 0.000
PTBP1 Meleagris gallopavo ENSMGAG00000003503 I 0.000
PTBP1 Macropus eugenii ENSMEUG00000006710 I 0.000
PTBP2 Loxodonta africana ENSLAFG00000017343 I 0.000
PTBP2 Gorilla gorilla ENSGGOG00000000659 I 0.000
Q9YI60_CHICK Gallus gallus ENSGALG00000005552 I 0.000
PTBP2 Anolis carolinensis ENSACAG00000005600 I 0.000
PTBP2 Dasypus novemcinctus ENSDNOG00000017687 N 0.000