SAFB2 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000018814 T35189_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000027756 RRM 349 419

Links

Other RRM family RBPs
Other Canis familiaris RBPs

137 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sltm Mus musculus ENSMUSG00000032212 N 0.746
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.986
SAFB Pan troglodytes ENSPTRG00000010335 N 0.887
SAFB Pteropus vampyrus ENSPVAG00000004913 N 0.901
SLTM Pteropus vampyrus ENSPVAG00000015056 N 0.761
Sltm Rattus norvegicus ENSRNOG00000013708 N 0.761
SAFB2 Sorex araneus ENSSARG00000000649 N 0.972
SAFB Sorex araneus ENSSARG00000010475 N 0.901
ENSSSCG00000004591 Sus scrofa ENSSSCG00000004591 N 0.746
ENSSSCG00000004592 Sus scrofa ENSSSCG00000004592 N 0.746
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.986
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.986
SLTM Tupaia belangeri ENSTBEG00000000945 N 0.761
SAFB-1 Taeniopygia guttata ENSTGUG00000000489 N 0.930
SAFB-2 Taeniopygia guttata ENSTGUG00000000502 N 0.873
SLTM Taeniopygia guttata ENSTGUG00000006017 N 0.789
SLTM Pan troglodytes ENSPTRG00000007121 N 0.761
ENSPPYG00000009428 Pongo pygmaeus ENSPPYG00000009428 N 0.901
Safb2 Mus musculus ENSMUSG00000042625 N 0.915
Safb Mus musculus ENSMUSG00000071054 N 0.901
SLTM Ornithorhynchus anatinus ENSOANG00000012311 N 0.775
ENSOANG00000013644 Ornithorhynchus anatinus ENSOANG00000013644 N 0.958
SAFB2 Oryctolagus cuniculus ENSOCUG00000001592 N 0.958
SLTM Oryctolagus cuniculus ENSOCUG00000003327 N 0.761
SAFB Oryctolagus cuniculus ENSOCUG00000014628 N 0.901
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.986
SLTM Otolemur garnettii ENSOGAG00000011297 N 0.761
SAFB Ochotona princeps ENSOPRG00000011561 N 0.887
SLTM Oryzias latipes ENSORLG00000008161 N 0.732
SAFB Oryzias latipes ENSORLG00000016989 N 0.887
SAFB2 Procavia capensis ENSPCAG00000006352 N 0.958
ENSPPYG00000006515 Pongo pygmaeus ENSPPYG00000006515 N 0.761
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.986
ENSTNIG00000015470 Tetraodon nigroviridis ENSTNIG00000015470 N 0.887
SAFB Takifugu rubripes ENSTRUG00000003567 N 0.901
GK14110 Drosophila willistoni FBgn0216116 N 0.718
GE23518 Drosophila yakuba FBgn0240697 N 0.718
GA26852-RA Drosophila pseudoobscura FBgn0248225 N 0.718
PHUM451590 Pediculus humanus PHUM451590 N 0.761
168846 Helobdella robusta 168846 N 0.789
estExt_fgenesh1_pg.C_1060073 Nematostella vectensis estExt_fgenesh1_pg.C_1060073 N 0.704
estExt_fgenesh2_pg.C_3630023 Branchiostoma floridae estExt_fgenesh2_pg.C_3630023 N 0.887
estExt_fgenesh2_pg.C_4200008 Branchiostoma floridae estExt_fgenesh2_pg.C_4200008 N 0.887
estExt_fgenesh2_pg.C_sca_50258 Lottia gigantea estExt_fgenesh2_pg.C_sca_50258 N 0.817
fgenesh1_pm.C_scaffold_151000005 Capitella teleta fgenesh1_pm.C_scaffold_151000005 N 0.859
NCBI_GNO_7700035 Daphnia pulex NCBI_GNO_7700035 N 0.704
Ame_R015170 Ailuropoda melanoleuca Ame_R015170 N 0.761
Ame_R016388 Ailuropoda melanoleuca Ame_R016388 N 0.986
Ame_R016389 Ailuropoda melanoleuca Ame_R016389 N 0.901
AAI00172 Xenopus laevis AAI00172 N 0.775
GJ23544 Drosophila virilis FBgn0210641 N 0.718
GD21133 Drosophila simulans FBgn0192585 N 0.718
SLTM Takifugu rubripes ENSTRUG00000017767 N 0.704
SAFB Tarsius syrichta ENSTSYG00000001851 N 0.901
SLTM Tursiops truncatus ENSTTRG00000005246 N 0.761
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.986
SAFB Tursiops truncatus ENSTTRG00000013588 N 0.901
SLTM Vicugna pacos ENSVPAG00000008606 N 0.761
SAFB Vicugna pacos ENSVPAG00000012043 N 0.901
sltm Xenopus tropicalis ENSXETG00000010840 N 0.775
CG6995 Drosophila melanogaster FBgn0039229 N 0.718
GF16243 Drosophila ananassae FBgn0093265 N 0.718
GG11323 Drosophila erecta FBgn0103624 N 0.718
GH19115 Drosophila grimshawi FBgn0126582 N 0.718
GI23570 Drosophila mojavensis FBgn0146296 N 0.718
GL13631 Drosophila persimilis FBgn0151236 N 0.718
GM26630 Drosophila sechellia FBgn0181483 N 0.718
Q498L2 Xenopus laevis Q498L2 N 0.775
XM_001377567.1 Monodelphis domestica ENSMODG00000008794 N 0.775
CpipJ_CPIJ012814 Culex pipiens CpipJ_CPIJ012814 N 0.761
SLTM Choloepus hoffmanni ENSCHOG00000001125 N 0.732
SAFB Callithrix jacchus ENSCJAG00000017081 N 0.901
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.986
SLTM Callithrix jacchus ENSCJAG00000020395 N 0.761
SAFB2 Cavia porcellus ENSCPOG00000011394 N 0.944
SLTM Cavia porcellus ENSCPOG00000026109 N 0.746
SAFB Cavia porcellus ENSCPOG00000026322 N 0.915
ENSDARG00000017150 Danio rerio ENSDARG00000017150 N 0.775
safb Danio rerio ENSDARG00000020467 N 0.930
SLTM Dasypus novemcinctus ENSDNOG00000002975 N 0.761
SAFB Dasypus novemcinctus ENSDNOG00000015746 N 0.901
Sltm Dipodomys ordii ENSDORG00000007463 N 0.775
Safb2 Dipodomys ordii ENSDORG00000016199 N 0.930
Safb Dipodomys ordii ENSDORG00000016200 N 0.901
LOC100068259 Equus caballus ENSECAG00000011267 N 0.761
SAFB Canis familiaris ENSCAFG00000018803 N 0.901
SLTM Canis familiaris ENSCAFG00000016586 N 0.761
amel4_ncbi_hmm13354 Apis mellifera amel4_ncbi_hmm13354 N 0.831
DGIL_AUG5s7140g4t1 Acyrtosiphon pisum DGIL_AUG5s7140g4t1 N 0.732
DGIL_AUG5s8592g2t1 Acyrtosiphon pisum DGIL_AUG5s8592g2t1 N 0.718
nasonia_NCBI_hmm598374 Nasonia vitripennis nasonia_NCBI_hmm598374 N 0.789
AAEL001352 Aedes aegypti AAEL001352 N 0.775
AGAP001298 Anopheles gambiae AGAP001298 N 0.746
CPIJ012814 Culex quinquefasciatus CPIJ012814 N 0.761
SLTM Anolis carolinensis ENSACAG00000015120 N 0.746
ENSACAG00000016893 Anolis carolinensis ENSACAG00000016893 N 0.930
ENSACAG00000016928 Anolis carolinensis ENSACAG00000016928 N 0.831
SAFB2 Bos taurus ENSBTAG00000001790 N 0.986
ENSBTAG00000007875 Bos taurus ENSBTAG00000007875 N 0.901
SLTM Bos taurus ENSBTAG00000011319 N 0.761
LOC787645 Bos taurus ENSBTAG00000035584 N 0.887
A7E314_BOVIN Bos taurus ENSBTAG00000035585 N 0.901
LOC100064953 Equus caballus ENSECAG00000018659 N 0.915
LOC100064922 Equus caballus ENSECAG00000018978 N 0.986
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.986
SAFB Loxodonta africana ENSLAFG00000003840 N 0.915
SLTM Loxodonta africana ENSLAFG00000017922 N 0.746
SAFB2 Macropus eugenii ENSMEUG00000002456 N 0.944
ENSMGAG00000001051 Meleagris gallopavo ENSMGAG00000001051 N 0.930
ENSMGAG00000001101 Meleagris gallopavo ENSMGAG00000001101 N 0.873
SLTM Meleagris gallopavo ENSMGAG00000005313 N 0.789
SAFB Microcebus murinus ENSMICG00000008739 N 0.901
SLTM Microcebus murinus ENSMICG00000013069 N 0.746
SAFB2 Myotis lucifugus ENSMLUG00000001050 N 0.972
SAFB Myotis lucifugus ENSMLUG00000001081 N 0.901
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.986
SAFB Macaca mulatta ENSMMUG00000017970 N 0.901
SLTM Macaca mulatta ENSMMUG00000022200 N 0.761
SAFB2 Monodelphis domestica ENSMODG00000001178 N 0.972
SAFB Gorilla gorilla ENSGGOG00000015109 N 0.901
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.986
SLTM Erinaceus europaeus ENSEEUG00000000580 N 0.746
SLTM Echinops telfairi ENSETEG00000008003 N 0.775
SAFB2 Echinops telfairi ENSETEG00000016756 N 0.972
SAFB Echinops telfairi ENSETEG00000018679 N 0.915
SLTM Felis catus ENSFCAG00000004826 N 0.746
SAFB2 Felis catus ENSFCAG00000011834 N 1.000
SAFB Felis catus ENSFCAG00000011835 N 0.901
SAFB2 Homo sapiens ENSG00000130254 N 0.986
SLTM Homo sapiens ENSG00000137776 N 0.761
SAFB Homo sapiens ENSG00000160633 N 0.901
SAFB Gasterosteus aculeatus ENSGACG00000011385 N 0.944
SLTM Gasterosteus aculeatus ENSGACG00000015814 N 0.704
SAFB2 Gallus gallus ENSGALG00000001948 N 0.930
SLTM Gallus gallus ENSGALG00000004192 N 0.789
SAFB2 Gallus gallus ENSGALG00000013365 N 0.873
ENSMODG00000001236 Monodelphis domestica ENSMODG00000001236 N 0.901