CNOT4 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000012532 T35588_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CNOT4
M147_0.6 		Homo sapiens GACAGA RNAcompete
Ray et al.(2013)
RNCMPT00156 		1.000
e_gw.71.47.1
M233_0.6 		Nematostella vectensis AGAYASA RNAcompete
Ray et al.(2013)
RNCMPT00278 		0.766
Cnot4
M008_0.6 		Drosophila melanogaster ASACAHW RNAcompete
Ray et al.(2013)
RNCMPT00008 		0.727
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000023003 RRM 111 187
ENSCJAP00000023016 RRM 111 187
ENSCJAP00000023026 RRM 111 187
ENSCJAP00000023030 RRM 111 187
ENSCJAP00000023039 RRM 111 187
ENSCJAP00000023050 RRM 111 187

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
sm Drosophila melanogaster FBgn0003435 D 0.000
GE13838 Drosophila yakuba FBgn0231486 I 0.000
GK15699 Drosophila willistoni FBgn0217702 I 0.000
GJ21415 Drosophila virilis FBgn0208541 I 0.000
GI18546 Drosophila mojavensis FBgn0141285 I 0.000
GH22768 Drosophila grimshawi FBgn0130225 I 0.000
GA21622-RA Drosophila pseudoobscura FBgn0081607 I 0.000
GM19822 Drosophila sechellia FBgn0174708 N 0.000
GG20899 Drosophila erecta FBgn0113083 N 0.000
GF13176 Drosophila ananassae FBgn0090209 N 0.000
CPIJ018342 Culex quinquefasciatus CPIJ018342 N 0.000
CPIJ006198 Culex quinquefasciatus CPIJ006198 N 0.000
AGAP012054 Anopheles gambiae AGAP012054 N 0.000
AAEL009659 Aedes aegypti AAEL009659 N 0.000
CpipJ_CPIJ018342 Culex pipiens CpipJ_CPIJ018342 N 0.000
CpipJ_CPIJ006198 Culex pipiens CpipJ_CPIJ006198 N 0.000