CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMEUG00000008083
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000008083
T38224_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000007378
RRM
14
83
IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AMAG_03225
Allomyces macrogynus
AMAG_03225
N
0.000
estExt_fgenesh1_pg.C_90140
Trichoderma atroviride
estExt_fgenesh1_pg.C_90140
N
0.000
estExt_Genewise1.C_820021
Melampsora laricis populina
estExt_Genewise1.C_820021
N
0.000
estExt_Genewise1Plus.C_200094
Postia placenta
estExt_Genewise1Plus.C_200094
N
0.000
estExt_Genewise1Plus.C_61440
Thielavia terrestris
estExt_Genewise1Plus.C_61440
N
0.000
fgenesh1_pg.C_scaffold_1000567
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_1000567
N
0.000
fgenesh1_pg.C_scaffold_4000265
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000265
N
0.000
Glyma02g29190.1
Glycine max
Glyma02g29190.1
N
0.000
Glyma09g17080.1
Glycine max
Glyma09g17080.1
N
0.000
Medtr1g137330
Medicago truncatula
Medtr1g137330
N
0.000
Medtr8g129780
Medicago truncatula
Medtr8g129780
N
0.000
fgeneshTM_pg.1_#_1063
Tremella mesenterica
fgeneshTM_pg.1_#_1063
N
0.000
GSTUMT00006382001
Tuber melanosporum
GSTUMT00006382001
N
0.000
Pa_3_7140
Podospora anserina
Pa_3_7140
N
0.000
e_gw1.87.91.1
Postia placenta
e_gw1.87.91.1
N
0.000
e_gw1.1.997.1
Trichoderma reesei
e_gw1.1.997.1
N
0.000
CC1G_06273
Coprinopsis cinerea
CC1G_06273
N
0.000
DEHA0A05764g
Debaryomyces hansenii
DEHA0A05764g
N
0.000
FGSG_04392
Fusarium graminearum
FGSG_04392
N
0.000
PABG_04180
Paracoccidioides brasiliensis
PABG_04180
N
0.000
PGTG_07909
Puccinia graminis
PGTG_07909
N
0.000
PTTG_07308
Puccinia triticina
PTTG_07308
N
0.000
SPPG_07834
Spizellomyces punctatus
SPPG_07834
N
0.000
B9HW06_POPTR
Populus trichocarpa
POPTR_0010s24120
N
0.000
29428.m000321
Ricinus communis
29428.m000321
N
0.000
e_gw1.10.335.1
Mucor circinelloides
e_gw1.10.335.1
N
0.000
e_gw1.11.592.1
Nectria haematococca
e_gw1.11.592.1
N
0.000
e_gw1.1.503.1
Phycomyces blakesleeanus
e_gw1.1.503.1
N
0.000
e_gw1.17.425.1
Trichoderma virens
e_gw1.17.425.1
N
0.000
ppa025985m
Prunus persica
ppa025985m
N
0.000