estExt_Genewise1.C_100240 (Cochliobolus heterostrophus C5)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_100240 T51162_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_100240 RRM 71 140

Links

Other RRM family RBPs
Other Cochliobolus heterostrophus C5 RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.714
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.700
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.857
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.800
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.843
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.743
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.814
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.761
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.814
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.800
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.746
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.814
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.800
NCU03946 Neurospora crassa NCU03946 N 0.814
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.714
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.957
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.829
Pa_4_2600 Podospora anserina Pa_4_2600 N 0.718
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.857
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.843
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.743
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.746
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.800
e_gw1.4.778.1 Heterobasidion annosum e_gw1.4.778.1 N 0.718
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.700
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.743
EDP44971.1 Malassezia globosa EDP44971.1 N 0.700
AB03725.1 Alternaria brassicicola AB03725.1 N 0.986
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.843
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.829
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.843
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.800
MCYG_08495 Microsporum canis MCYG_08495 N 0.843
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.814
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.786
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.786
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.771
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.857
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.743
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.857
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.746
CC1G_14585 Coprinopsis cinerea CC1G_14585 N 0.714
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.871
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.829
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.871
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.971
An08g01040 Aspergillus niger CADANGAG00006423 N 0.857
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.843
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.843
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.814
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.814
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.857
UM02401 Ustilago maydis UM02401 N 0.714
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.829
TERG_02884 Trichophyton rubrum TERG_02884 N 0.829
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.814
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.957
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.800
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.814