gw1.7.208.1 (Melampsora laricis populina)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.7.208.1 T53352_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.7.208.1 RRM 55 124

Links

Other RRM family RBPs
Other Melampsora laricis populina RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q7ZXB8 Xenopus laevis Q7ZXB8 I 0.700
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.729
fgenesh2_pm.scaffold_317000002 Branchiostoma floridae fgenesh2_pm.scaffold_317000002 I 0.718
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.714
e_gw1.14.113.1 Trichoplax adhaerens e_gw1.14.113.1 I 0.700
PABPN1 Monodelphis domestica ENSMODG00000004535 I 0.700
AAH45063 Xenopus laevis AAH45063 I 0.700
NCU03946 Neurospora crassa NCU03946 N 0.700
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.704
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.700
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.700
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.743
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.700
gwEuk.4.69.1 Phytophthora ramorum gwEuk.4.69.1 N 0.714
s_459723 Phytophthora sojae s_459723 N 0.714
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.700
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.700
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.700
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.714
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.714
estExt_fgenesh1_pg.C_120138 Phytophthora capsici estExt_fgenesh1_pg.C_120138 N 0.714
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.700
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.714
EDP44971.1 Malassezia globosa EDP44971.1 N 0.714
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.714
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.700
PTTG_05043 Puccinia triticina PTTG_05043 N 0.914
PITG_15784 Phytophthora infestans PITG_15784 N 0.714
PGTG_01300 Puccinia graminis PGTG_01300 N 0.929
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.700
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.729
MCYG_08495 Microsporum canis MCYG_08495 N 0.714
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.700
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.729
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.729
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.704
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.700
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.743
SPRG_02264 Saprolegnia parasitica SPRG_02264 N 0.714
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.714
An08g01040 Aspergillus niger CADANGAG00006423 N 0.729
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.714
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.714
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.700
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.700
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.714
UM02401 Ustilago maydis UM02401 N 0.729
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.729
TERG_02884 Trichophyton rubrum TERG_02884 N 0.729
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.700