GRMZM2G092493 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G092493 T54103_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.706
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G092493_P01 RRM 41 99
GRMZM2G092493_P02 RRM 41 99
GRMZM2G092493_P03 RRM 41 99
GRMZM2G092493_P04 RRM 41 99

Links

Other RRM family RBPs
Other Zea mays RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G76460-TAIR-G Arabidopsis thaliana AT1G76460-TAIR-G D 0.706
PK21213.1 Cannabis sativa PK21213.1 I 0.716
cassava6633.valid.m1 Manihot esculenta cassava6633.valid.m1 I 0.710
cassava6634.valid.m1 Manihot esculenta cassava6634.valid.m1 I 0.710
e_gw1.23.82.1 Selaginella moellendorfii e_gw1.23.82.1 I 0.746
Glyma09g36880.1 Glycine max Glyma09g36880.1 I 0.729
Glyma12g00500.1 Glycine max Glyma12g00500.1 I 0.729
mgf017214m Mimulus guttatus mgf017214m I 0.706
GRMZM2G005236 Zea mays GRMZM2G005236 I 0.712
GRMZM2G019266 Zea mays GRMZM2G019266 I 0.729
GRMZM2G073700 Zea mays GRMZM2G073700 I 0.725
Medtr3g159840 Medicago truncatula Medtr3g159840 I 0.701
chr1.CM0150.310.nc Lotus japonicus chr1.CM0150.310.nc I 0.754
LjT28A08.70.nc Lotus japonicus LjT28A08.70.nc I 0.710
MDP0000138486 Malus x domestica MDP0000138486 I 0.716
PDK_20s1420851g001 Phoenix dactylifera PDK_20s1420851g001 I 0.729
BRADI2G56676 Brachypodium distachyon BRADI2G56676 I 0.712
BGIOSIBCE004465 Oryza indica BGIOSIBCE004465 I 0.729
XM_002893090.1 Arabidopsis lyrata fgenesh2_kg.1__2278__AT1G20880.1 I 0.847
BGIOSIBCE022665 Oryza indica BGIOSIBCE022665 I 0.949
GSVIVG00013430001 Vitis vinifera GSVIVG00013430001 I 0.797
LOC_Os01g65550 Oryza sativa LOC_Os01g65550 I 0.729
AT1G20880 Arabidopsis thaliana AT1G20880-TAIR-G I 0.790
LOC_Os06g41790 Oryza sativa LOC_Os06g41790 I 0.949
SB03G041530 Sorghum bicolor Sb03g041530 I 0.729
BRADI1G45540 Brachypodium distachyon BRADI1G45540 I 0.725
AT1G33470 Arabidopsis thaliana AT1G33470-TAIR-G N 0.712
BGIOSIBCE005068 Oryza indica BGIOSIBCE005068 N 0.746
GRMZM2G180639 Zea mays GRMZM2G180639 N 0.983
SB03G046430 Sorghum bicolor Sb03g046430 N 0.763
XM_002890997.1 Arabidopsis lyrata fgenesh2_kg.1__3472__AT1G33470.1 N 0.712
LOC_Os01g72834 Oryza sativa LOC_Os01g72834 N 0.746
SB10G024450 Sorghum bicolor Sb10g024450 N 0.983