fgenesh3_pg.49__68 (Postia placenta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh3_pg.49__68 T14321_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh3_pg.49__68 CCHC ZF 188 205

Links

Other CCHC ZF family RBPs
Other Postia placenta RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
112541 Helobdella robusta 112541 N 0.000
AAB50269 Xenopus laevis AAB50269 N 0.000
AAH41291 Xenopus laevis AAH41291 N 0.000
AAH80037 Xenopus laevis AAH80037 N 0.000
AB08285.1 Alternaria brassicicola AB08285.1 N 0.000
amel4_ncbi_hmm3649 Apis mellifera amel4_ncbi_hmm3649 N 0.000
Ame_R018612 Ailuropoda melanoleuca Ame_R018612 N 0.000
BC1G_15665 Botrytis cinerea BC1G_15665 N 0.000
BGIBMGA006476 Bombyx mori BGIBMGA006476 N 0.000
CHGG_01583 Chaetomium globosum CHGG_01583 N 0.000
CstF-64 Drosophila melanogaster FBgn0027841 N 0.000
Cstf2 Mus musculus ENSMUSG00000031256 N 0.000
CSTF2 Macaca mulatta ENSMMUG00000013008 N 0.000
CSTF2 Myotis lucifugus ENSMLUG00000004598 N 0.000
CSTF2 Microcebus murinus ENSMICG00000014121 N 0.000
CSTF2 Loxodonta africana ENSLAFG00000000474 N 0.000
CSTF2 Gorilla gorilla ENSGGOG00000022267 N 0.000
CSTF2 Gasterosteus aculeatus ENSGACG00000017326 N 0.000
CSTF2 Oryctolagus cuniculus ENSOCUG00000010468 N 0.000
CSTF2 Oryzias latipes ENSORLG00000001380 N 0.000
CSTF2 Pan troglodytes ENSPTRG00000022090 N 0.000
CSTF2 Felis catus ENSFCAG00000007000 N 0.000
CSTF2 Sus scrofa ENSSSCG00000012486 N 0.000
CSTF2 Taeniopygia guttata ENSTGUG00000002253 N 0.000
CSTF2 Tetraodon nigroviridis ENSTNIG00000016860 N 0.000
CSTF2 Takifugu rubripes ENSTRUG00000004323 N 0.000
CSTF2 Tursiops truncatus ENSTTRG00000013556 N 0.000
cstf2 Xenopus tropicalis ENSXETG00000009642 N 0.000
CSTF2 Homo sapiens ENSG00000101811 N 0.000
CSTF2 Canis familiaris ENSCAFG00000017551 N 0.000
CSTF2 Callithrix jacchus ENSCJAG00000004422 N 0.000
CSTF2 Cavia porcellus ENSCPOG00000015255 N 0.000
cstf2 Danio rerio ENSDARG00000044009 N 0.000
CSTF2T Pteropus vampyrus ENSPVAG00000006274 N 0.000
CSTF2T Macaca mulatta ENSMMUG00000010845 N 0.000
CSTF2T Choloepus hoffmanni ENSCHOG00000011888 N 0.000
CSTF2T Felis catus ENSFCAG00000013011 N 0.000
Cstf2t Mus musculus ENSMUSG00000053536 N 0.000
CSTF2T Procavia capensis ENSPCAG00000000046 N 0.000
CSTF2T Tursiops truncatus ENSTTRG00000003341 N 0.000
CSTF2T Spermophilus tridecemlineatus ENSSTOG00000005624 N 0.000
CSTF2T Sorex araneus ENSSARG00000002013 N 0.000
CSTF2T Pan troglodytes ENSPTRG00000002510 N 0.000
CSTF2T Myotis lucifugus ENSMLUG00000011187 N 0.000
CSTF2T Loxodonta africana ENSLAFG00000002058 N 0.000
CSTF2T Canis familiaris ENSCAFG00000015567 N 0.000
CSTF2T Homo sapiens ENSG00000177613 N 0.000
CSTF2T Callithrix jacchus ENSCJAG00000005033 N 0.000
CSTF2_BOVIN Bos taurus ENSBTAG00000003547 N 0.000
CSTF64 Arabidopsis thaliana AT1G71800-TAIR-G N 0.000
Cucsa.364140 Cucumis sativus Cucsa.364140 N 0.000
D3ZKA4_RAT Rattus norvegicus ENSRNOG00000022436 N 0.000
DGIL_AUG5s12011g4t1 Acyrtosiphon pisum DGIL_AUG5s12011g4t1 N 0.000
DGIL_AUG5s2502g11t1 Acyrtosiphon pisum DGIL_AUG5s2502g11t1 N 0.000
EAT89416.2 Phaeosphaeria nodorum EAT89416.2 N 0.000
ENSACAG00000004388 Anolis carolinensis ENSACAG00000004388 N 0.000
ENSCPOG00000004195 Cavia porcellus ENSCPOG00000004195 N 0.000
ENSGGOG00000022117 Gorilla gorilla ENSGGOG00000022117 N 0.000
ENSGGOG00000026139 Gorilla gorilla ENSGGOG00000026139 N 0.000
ENSMEUG00000007875 Macropus eugenii ENSMEUG00000007875 N 0.000
ENSMEUG00000011186 Macropus eugenii ENSMEUG00000011186 N 0.000
ENSMODG00000011785 Monodelphis domestica ENSMODG00000011785 N 0.000
ENSPPYG00000002441 Pongo pygmaeus ENSPPYG00000002441 N 0.000
ENSPPYG00000020541 Pongo pygmaeus ENSPPYG00000020541 N 0.000
ENSSSCG00000009884 Sus scrofa ENSSSCG00000009884 N 0.000
ENSSSCG00000010430 Sus scrofa ENSSSCG00000010430 N 0.000
estExt_fgenesh1_pg.C_160182 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160182 N 0.000
estExt_fgenesh3_kg.C_70160 Neurospora discreta estExt_fgenesh3_kg.C_70160 N 0.000
estExt_Genewise1Plus.C_20994 Myceliophthora thermophila estExt_Genewise1Plus.C_20994 N 0.000
estExt_Genewise1Plus.C_50197 Neurospora tetrasperma estExt_Genewise1Plus.C_50197 N 0.000
e_gw.312.28.1 Nematostella vectensis e_gw.312.28.1 N 0.000
e_gw.65.105.1 Branchiostoma floridae e_gw.65.105.1 N 0.000
e_gw.65.110.1 Branchiostoma floridae e_gw.65.110.1 N 0.000
e_gw1.1.4045.1 Trichoderma atroviride e_gw1.1.4045.1 N 0.000
e_gw1.4.400.1 Trichoderma reesei e_gw1.4.400.1 N 0.000
e_gw1.4.931.1 Thielavia terrestris e_gw1.4.931.1 N 0.000
e_gw1.6.1433.1 Cryphonectria parasitica e_gw1.6.1433.1 N 0.000
e_gw1.7.1285.1 Trichoderma virens e_gw1.7.1285.1 N 0.000
fgenesh1_pg.sca_1_chr1_3_0000632 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000632 N 0.000
FGSG_00370 Fusarium graminearum FGSG_00370 N 0.000
FOXG_00686 Fusarium oxysporum FOXG_00686 N 0.000
FVEG_00825 Fusarium verticillioides FVEG_00825 N 0.000
GA20525-RA Drosophila pseudoobscura FBgn0080519 N 0.000
GD19237 Drosophila simulans FBgn0190742 N 0.000
GE25546 Drosophila yakuba FBgn0242611 N 0.000
GF16912 Drosophila ananassae FBgn0093932 N 0.000
GG22991 Drosophila erecta FBgn0115148 N 0.000
GH18352 Drosophila grimshawi FBgn0125820 N 0.000
GI23336 Drosophila mojavensis FBgn0146063 N 0.000
GJ10336 Drosophila virilis FBgn0197622 N 0.000
GK14167 Drosophila willistoni FBgn0216173 N 0.000
GL24357 Drosophila persimilis FBgn0161947 N 0.000
GLRG_10397 Colletotrichum graminicola GLRG_10397 N 0.000
Glyma10g36350.1 Glycine max Glyma10g36350.1 N 0.000
Glyma20g31220.1 Glycine max Glyma20g31220.1 N 0.000
GM17877 Drosophila sechellia FBgn0172784 N 0.000
ISCW015573 Ixodes scapularis ISCW015573 N 0.000
LjSGA_018671.1 Lotus japonicus LjSGA_018671.1 N 0.000
MDP0000142436 Malus x domestica MDP0000142436 N 0.000
MDP0000283046 Malus x domestica MDP0000283046 N 0.000
MGG_09885 Magnaporthe oryzae MGG_09885 N 0.000
nasonia_NCBI_hmm235054 Nasonia vitripennis nasonia_NCBI_hmm235054 N 0.000
NCU03311 Neurospora crassa NCU03311 N 0.000
Pa_1_6970 Podospora anserina Pa_1_6970 N 0.000
PK22244.1 Cannabis sativa PK22244.1 N 0.000
ppa004010m Prunus persica ppa004010m N 0.000
Q5ZLS0_CHICK Gallus gallus ENSGALG00000006760 N 0.000
RO3G_14170 Rhizopus oryzae RO3G_14170 N 0.000
SNAPOd2T00016915001 Oikopleura dioica SNAPOd2T00016915001 N 0.000
SNOG_02685 Stagonospora nodorum SNOG_02685 N 0.000
SS1G_09907 Sclerotinia sclerotiorum SS1G_09907 N 0.000
VDAG_04254 Verticillium dahliae VDAG_04254 N 0.000
XM_002887343.1 Arabidopsis lyrata Al_scaffold_0002_1857 N 0.000