amel4_ncbi_hmm37854 (Apis mellifera)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 amel4_ncbi_hmm37854 T17988_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fmr1
M015_0.6 		Drosophila melanogaster AHGGACR RNAcompete
Ray et al.(2013)
RNCMPT00015 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm37854 KH 280 339
amel4_ncbi_hmm37854 KH 343 413

Links

Other KH family RBPs
Other Apis mellifera RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC59682 Xenopus laevis AAC59682 I 0.720
AAC59683 Xenopus laevis AAC59683 I 0.710
AAEL009326 Aedes aegypti AAEL009326 I 0.885
AAH43638 Xenopus laevis AAH43638 I 0.727
AAH73457 Xenopus laevis AAH73457 I 0.727
AAI12953 Xenopus laevis AAI12953 I 0.710
AAI31885 Xenopus laevis AAI31885 I 0.727
AAI70204 Xenopus laevis AAI70204 I 0.710
AAY79165 Xenopus laevis AAY79165 I 0.727
AAY79166 Xenopus laevis AAY79166 I 0.727
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.720
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.705
CPIJ019402 Culex quinquefasciatus CPIJ019402 I 0.863
CpipJ_CPIJ019402 Culex pipiens CpipJ_CPIJ019402 I 0.863
DGIL_AUG5s14500g26t1 Acyrtosiphon pisum DGIL_AUG5s14500g26t1 N 0.817
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.712
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.705
estExt_fgenesh1_pg.C_690020 Daphnia pulex estExt_fgenesh1_pg.C_690020 N 0.824
estExt_Genewise1Plus.C_sca_330296 Lottia gigantea estExt_Genewise1Plus.C_sca_330296 N 0.705
e_gw1.377.37.1 Capitella teleta e_gw1.377.37.1 N 0.704
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.710
Fmr1 Drosophila melanogaster FBgn0028734 D 0.748
FMR1 Canis familiaris ENSCAFG00000019085 I 0.725
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.720
FXR1 Oryzias latipes ENSORLG00000011787 I 0.712
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.705
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.705
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.705
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.712
FXR1 Sus scrofa ENSSSCG00000011769 I 0.705
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.727
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.720
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.705
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.705
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.735
Fxr1 Mus musculus ENSMUSG00000027680 I 0.712
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.705
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.705
FXR1 Homo sapiens ENSG00000114416 D 0.705
FXR1 Echinops telfairi ENSETEG00000006891 I 0.705
FXR1 Equus caballus ENSECAG00000007560 I 0.705
fxr1 Danio rerio ENSDARG00000022968 I 0.705
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.705
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.705
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.705
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.727
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.727
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.705
FXR1 Canis familiaris ENSCAFG00000011582 I 0.705
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.705
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.705
FXR2 Echinops telfairi ENSETEG00000018613 I 0.712
FXR2 Felis catus ENSFCAG00000009620 I 0.712
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.712
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.720
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.712
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.712
FXR2 Bos taurus ENSBTAG00000005462 I 0.712
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.712
FXR2 Canis familiaris ENSCAFG00000016685 I 0.720
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.712
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.710
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.712
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.712
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.705
FXR2 Microcebus murinus ENSMICG00000014799 I 0.712
FXR2 Procavia capensis ENSPCAG00000013184 I 0.705
Fxr2 Mus musculus ENSMUSG00000018765 I 0.712
FXR2 Oryzias latipes ENSORLG00000011571 I 0.748
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.712
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.712
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.712
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.712
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.712
FXR2 Sus scrofa ENSSSCG00000017953 I 0.712
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.718
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.712
FXR2 Homo sapiens ENSG00000129245 D 0.712
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.712
GD20735 Drosophila simulans FBgn0192201 I 0.748
GE24705 Drosophila yakuba FBgn0241810 I 0.733
GF17134 Drosophila ananassae FBgn0094153 I 0.733
GG17303 Drosophila erecta FBgn0109530 I 0.733
GI24444 Drosophila mojavensis FBgn0147166 I 0.733
GJ10720 Drosophila virilis FBgn0197997 I 0.733
GK12202 Drosophila willistoni FBgn0214213 I 0.740
GM26187 Drosophila sechellia FBgn0181042 I 0.748
LOC100147323 Equus caballus ENSECAG00000007051 I 0.712
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.939
P51113 Xenopus laevis P51113 I 0.710
P51115 Xenopus laevis P51115 I 0.727
PHUM440700 Pediculus humanus PHUM440700 I 0.931
Q2KHP9 Xenopus laevis Q2KHP9 I 0.710
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.727
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.705
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.727