PCBP4 (Cavia porcellus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCPOG00000014617 T18582_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.747
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.711
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.711
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.700
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000013171 KH 19 79
ENSCPOP00000013171 KH 103 166
ENSCPOP00000013171 KH 243 305

Links

Other KH family RBPs
Other Cavia porcellus RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6ML91_CALJA Callithrix jacchus ENSCJAG00000020846 N 0.000
Ame_R013963 Ailuropoda melanoleuca Ame_R013963 N 0.000
CU693494.1 Danio rerio ENSDARG00000076995 N 0.000
ENSGACG00000002544 Gasterosteus aculeatus ENSGACG00000002544 N 0.000
ENSGACG00000017834 Gasterosteus aculeatus ENSGACG00000017834 N 0.000
ENSMGAG00000007903 Meleagris gallopavo ENSMGAG00000007903 N 0.000
ENSORLG00000017281 Oryzias latipes ENSORLG00000017281 N 0.000
ENSPPYG00000010868 Pongo pygmaeus ENSPPYG00000010868 N 0.000
ENSTNIG00000008521 Tetraodon nigroviridis ENSTNIG00000008521 N 0.000
ENSTRUG00000006949 Takifugu rubripes ENSTRUG00000006949 N 0.000
ENSTRUG00000011046 Takifugu rubripes ENSTRUG00000011046 N 0.000
LOC100065232 Equus caballus ENSECAG00000001400 N 0.000
LOC100392136 Callithrix jacchus ENSCJAG00000021452 N 0.000
RBCK1 Pan troglodytes ENSPTRG00000013144 N 0.000
RBCK1 Procavia capensis ENSPCAG00000001109 N 0.000
RBCK1 Oryctolagus cuniculus ENSOCUG00000007636 N 0.000
Rbck1 Rattus norvegicus ENSRNOG00000006695 N 0.000
RBCK1 Spermophilus tridecemlineatus ENSSTOG00000008625 N 0.000
RBCK1 Tupaia belangeri ENSTBEG00000013740 N 0.000
RBCK1 Cavia porcellus ENSCPOG00000005720 N 0.000
RBCK1 Tursiops truncatus ENSTTRG00000005104 N 0.000
RBCK1 Vicugna pacos ENSVPAG00000000451 N 0.000
RBCK1 Pteropus vampyrus ENSPVAG00000011249 N 0.000
Rbck1 Mus musculus ENSMUSG00000027466 N 0.000
RBCK1 Monodelphis domestica ENSMODG00000019512 N 0.000
RBCK1 Erinaceus europaeus ENSEEUG00000013802 N 0.000
RBCK1 Felis catus ENSFCAG00000003278 N 0.000
rbck1 Danio rerio ENSDARG00000031954 N 0.000
RBCK1 Homo sapiens ENSG00000125826 N 0.000
RBCK1 Dasypus novemcinctus ENSDNOG00000017407 N 0.000
RBCK1 Gorilla gorilla ENSGGOG00000008982 N 0.000
RBCK1 Loxodonta africana ENSLAFG00000027558 N 0.000
RBCK1 Microcebus murinus ENSMICG00000013495 N 0.000
RBCK1 Macaca mulatta ENSMMUG00000012601 N 0.000
RBCK1 Canis familiaris ENSCAFG00000006921 N 0.000
SHARPIN Cavia porcellus ENSCPOG00000013242 N 0.000
SHARPIN Anolis carolinensis ENSACAG00000007245 N 0.000
SHARPIN Sus scrofa ENSSSCG00000005914 N 0.000
SHARPIN Gallus gallus ENSGALG00000022341 N 0.000
SHARPIN Monodelphis domestica ENSMODG00000010491 N 0.000
SHARPIN Bos taurus ENSBTAG00000012235 N 0.000