CAOG_06930 (Capsaspora owczarzaki)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CAOG_06930 T28493_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CAOG_06930T0 RRM 36 106

Links

Other RRM family RBPs
Other Capsaspora owczarzaki RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.732
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.704
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.732
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.746
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.704
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.704
Cbp20 Drosophila melanogaster FBgn0022943 N 0.704
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.704
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.704
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.718
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.718
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.732
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.704
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.718
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.718
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.718
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.718
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.704
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.704
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.718
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.704
GD19204 Drosophila simulans FBgn0190709 N 0.704
GE25514 Drosophila yakuba FBgn0242580 N 0.704
GF16759 Drosophila ananassae FBgn0093780 N 0.718
GG22670 Drosophila erecta FBgn0114835 N 0.704
GH15101 Drosophila grimshawi FBgn0122576 N 0.718
GI23717 Drosophila mojavensis FBgn0146442 N 0.718
GJ23276 Drosophila virilis FBgn0210378 N 0.718
GK11244 Drosophila willistoni FBgn0213255 N 0.718
GL12592 Drosophila persimilis FBgn0150198 N 0.704
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.718
GM15280 Drosophila sechellia FBgn0170200 N 0.704
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.732
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.732
gw1.14.317.1 Chlorella NC64A gw1.14.317.1 N 0.704
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.704
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.704
MCYG_04468 Microsporum canis MCYG_04468 N 0.704
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.718
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.704
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.704
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.704
ncbp2 Danio rerio ENSDARG00000014898 N 0.704
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.704
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.704
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.732
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.704
NCU00210 Neurospora crassa NCU00210 N 0.718
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.704
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.704
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.718
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.718
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.718
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.704
TERG_03424 Trichophyton rubrum TERG_03424 N 0.704
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.732
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.732