BRADI3G20700 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G20700 T33234_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G20700.1 RRM 16 84
BRADI3G20700.1 RRM 104 175
BRADI3G20700.2 RRM 1 39
BRADI3G20700.2 RRM 59 130

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29629.m001425 Ricinus communis 29629.m001425 N 0.709
AC186319.4_FG002 Zea mays AC186319.4_FG002 N 0.765
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.872
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.702
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.716
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.709
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.702
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.702
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.723
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.702
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.872
PDK_20s1371981g001 Phoenix dactylifera PDK_20s1371981g001 N 0.750
PK22392.1 Cannabis sativa PK22392.1 N 0.702
ppa007812m Prunus persica ppa007812m N 0.702
SB03G027920 Sorghum bicolor Sb03g027920 N 0.865