PK22392.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK22392.1 T31747_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK22392.1 RRM 24 92
PK22392.1 RRM 112 182

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.893
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.886
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.886
ppa006963m Prunus persica ppa006963m N 0.879
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.879
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.879
29629.m001425 Ricinus communis 29629.m001425 N 0.879
MDP0000202850 Malus x domestica MDP0000202850 N 0.879
MDP0000191633 Malus x domestica MDP0000191633 N 0.864
MDP0000220851 Malus x domestica MDP0000220851 N 0.864
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.857
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.850
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.836
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.779
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.779
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.764
Glyma19g00530.1 Glycine max Glyma19g00530.1 N 0.757
Glyma19g10300.1 Glycine max Glyma19g10300.1 N 0.757
mgf019396m Mimulus guttatus mgf019396m N 0.757
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 0.757
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.757
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.750
ppa007812m Prunus persica ppa007812m N 0.750
PDK_20s1363571g001 Phoenix dactylifera PDK_20s1363571g001 N 0.743
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.738
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.738
GSVIVG00030120001 Vitis vinifera GSVIVG00030120001 N 0.736
MDP0000288646 Malus x domestica MDP0000288646 N 0.729
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.729
ppa007179m Prunus persica ppa007179m N 0.729
PK13311.1 Cannabis sativa PK13311.1 N 0.729
MDP0000908645 Malus x domestica MDP0000908645 N 0.729
29917.m002004 Ricinus communis 29917.m002004 N 0.729
SB03G027920 Sorghum bicolor Sb03g027920 N 0.723
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.714
MDP0000270712 Malus x domestica MDP0000270712 N 0.707
GSVIVG00032402001 Vitis vinifera GSVIVG00032402001 N 0.707
Medtr3g106660 Medicago truncatula Medtr3g106660 N 0.707
MDP0000303054 Malus x domestica MDP0000303054 N 0.707
BRADI3G20700 Brachypodium distachyon BRADI3G20700 N 0.702
BRADI3G39090 Brachypodium distachyon BRADI3G39090 N 0.700