CPIJ001612 (Culex quinquefasciatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CPIJ001612 T34200_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Hrb87F
M029_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00029 		0.771
Hrb98DE
M093_0.6 		Drosophila melanogaster RGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00096 		0.743
Hrb98DE
M092_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00095 		0.743
Hrb98DE
M091_0.6 		Drosophila melanogaster GKUAGGK RNAcompete
Ray et al.(2013)
RNCMPT00094 		0.743
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CPIJ001612-PA RRM 26 95
CPIJ001612-PA RRM 117 186

Links

Other RRM family RBPs
Other Culex quinquefasciatus RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CG9425 Drosophila melanogaster FBgn0036451 N 0.000
GA21777-RA Drosophila pseudoobscura FBgn0081762 N 0.000
GD14504 Drosophila simulans FBgn0186186 N 0.000
GE22030 Drosophila yakuba FBgn0239262 N 0.000
GF24619 Drosophila ananassae FBgn0101612 N 0.000
GG15699 Drosophila erecta FBgn0107943 N 0.000
GH16935 Drosophila grimshawi FBgn0124406 N 0.000
GI13941 Drosophila mojavensis FBgn0136695 N 0.000
GJ13732 Drosophila virilis FBgn0200953 N 0.000
GK10580 Drosophila willistoni FBgn0212595 N 0.000
GL26040 Drosophila persimilis FBgn0163622 N 0.000