CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000016194
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000016194
T38775_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000014758
RRM
92
159
LLLSNLDFGVSDADIQQLFAEFGPLKQAAVHYDRSGRSLGTAHVHFERKADALEARKQYNGVPLDVNR
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
81 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL005114
Aedes aegypti
AAEL005114
N
0.714
AAEL015263
Aedes aegypti
AAEL015263
N
0.714
AAH74336
Xenopus laevis
AAH74336
N
0.829
AAH92013
Xenopus laevis
AAH92013
N
0.829
AGAP006733
Anopheles gambiae
AGAP006733
N
0.714
aly
Drosophila yakuba
FBgn0068000
N
0.000
Aly
Drosophila melanogaster
FBgn0010774
N
0.000
amel4_ncbi_hmm10980
Apis mellifera
amel4_ncbi_hmm10980
N
0.757
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.829
Aqu1.225634
Amphimedon queenslandica
Aqu1.225634
N
0.000
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.743
CPIJ007834
Culex quinquefasciatus
CPIJ007834
N
0.714
CpipJ_CPIJ007834
Culex pipiens
CpipJ_CPIJ007834
N
0.714
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.783
ENSGACG00000018178
Gasterosteus aculeatus
ENSGACG00000018178
N
0.714
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.829
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.786
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.829
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.829
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.757
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.757
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.757
GA10707-RA
Drosophila pseudoobscura
FBgn0070763
N
0.000
GF17326
Drosophila ananassae
FBgn0094344
N
0.000
GG10124
Drosophila erecta
FBgn0102435
N
0.000
GH18594
Drosophila grimshawi
FBgn0126061
N
0.000
GI23076
Drosophila mojavensis
FBgn0145803
N
0.000
GJ22697
Drosophila virilis
FBgn0209801
N
0.000
GK12741
Drosophila willistoni
FBgn0214750
N
0.000
GL12678
Drosophila persimilis
FBgn0150284
N
0.000
GM10513
Drosophila sechellia
FBgn0165460
N
0.000
ISCW001860
Ixodes scapularis
ISCW001860
N
0.729
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.829
nasonia_NCBI_hmm488134
Nasonia vitripennis
nasonia_NCBI_hmm488134
N
0.000
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.729
PHUM023420
Pediculus humanus
PHUM023420
N
0.000
Q58EA2
Xenopus laevis
Q58EA2
N
0.829
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.829
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.786
Smp_108820
Schistosoma mansoni
Smp_108820
N
0.743
tho4
Danio rerio
ENSDARG00000077732
N
0.829
THOC4
Homo sapiens
ENSG00000183684
N
0.829
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.829
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.829
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.829
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.829
THOC4
Gallus gallus
ENSGALG00000007237
N
0.829
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.771
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.829
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.853
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.829
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.829
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.829
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.829
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.829
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.829
THOC4
Takifugu rubripes
ENSTRUG00000008828
N
0.800
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.800
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.841
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.829
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.829
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.800
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.829
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.829
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.829
XP_001185635.1
Strongylocentrotus purpuratus
XP_001185635.1
N
0.000
XP_782040.2
Strongylocentrotus purpuratus
XP_782040.2
N
0.000