CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Rbm33
(
Mus musculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMUSG00000048271
T39373_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000062449
RRM
586
650
VSVEGLSSSTTDVQLKSLLMSVGPIQSLQMLPQQRKAIAKFKEPAHALAFQQKFHRHMIDLSHIN
ENSMUSP00000110534
RRM
1121
1185
VSVEGLSSSTTDVQLKSLLMSVGPIQSLQMLPQQRKAIAKFKEPAHALAFQQKFHRHMIDLSHIN
ENSMUSP00000121879
RRM
120
184
VSVEGLSSSTTDVQLKSLLMSVGPIQSLQMLPQQRKAIAKFKEPAHALAFQQKFHRHMIDLSHIN
ENSMUSP00000122901
RRM
8
65
VSVEGLSSSTTDVQLKSLLMSVGPIQSLQMLPQQRKAIAKFKEPAHALAFQQKFHRKL
Links
Other
RRM
family RBPs
Other
Mus musculus
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_052020
Aspergillus clavatus
CADACLAG00005073
N
0.000
AFLA_051800
Aspergillus flavus
CADAFLAG00011171
N
0.000
AFUA_4G13020
Aspergillus fumigatus
CADAFUAG00007954
N
0.000
An01g08600
Aspergillus niger
CADANGAG00000860
N
0.000
ANIA_03578
Aspergillus nidulans
CADANIAG00005166
N
0.000
AO090009000286
Aspergillus oryzae
CADAORAG00003756
N
0.000
ARB_00116
Arthroderma benhamiae
ARB_00116
N
0.000
ATEG_03185
Aspergillus terreus
CADATEAG00008323
N
0.000
BC1G_00189
Botrytis cinerea
BC1G_00189
N
0.000
BDBG_02229
Blastomyces dermatitidis
BDBG_02229
N
0.000
CIMG_00632
Coccidioides immitis
CIMG_00632
N
0.000
CPSG_09242
Coccidioides posadasii
CPSG_09242
N
0.000
estExt_Genewise1.C_290124
Neurospora tetrasperma
estExt_Genewise1.C_290124
N
0.000
estExt_Genewise1Plus.C_13473
Trichoderma atroviride
estExt_Genewise1Plus.C_13473
N
0.000
e_gw1.5.87.1
Trichoderma reesei
e_gw1.5.87.1
N
0.000
e_gw1.6.94.1
Cryphonectria parasitica
e_gw1.6.94.1
N
0.000
fgenesh1_pg.C_scaffold_7000377
Trichoderma virens
fgenesh1_pg.C_scaffold_7000377
N
0.000
fgenesh1_pm.00009_#_468
Aspergillus carbonarius
fgenesh1_pm.00009_#_468
N
0.000
fgenesh1_pm.sca_3_chr4_2_0000335
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000335
N
0.000
fgenesh2_pm.1_#_1003
Thielavia terrestris
fgenesh2_pm.1_#_1003
N
0.000
FGSG_12995
Fusarium graminearum
FGSG_12995
N
0.000
FOXG_01987
Fusarium oxysporum
FOXG_01987
N
0.000
FVEG_05147
Fusarium verticillioides
FVEG_05147
N
0.000
GLRG_01552
Colletotrichum graminicola
GLRG_01552
N
0.000
GSTUMT00011195001
Tuber melanosporum
GSTUMT00011195001
N
0.000
HCAG_07022
Histoplasma capsulatum
HCAG_07022
N
0.000
MCYG_01086
Microsporum canis
MCYG_01086
N
0.000
MGG_04405
Magnaporthe oryzae
MGG_04405
N
0.000
MGYG_01632
Microsporum gypseum
MGYG_01632
N
0.000
NCU07418
Neurospora crassa
NCU07418
N
0.000
NFIA_103330
Neosartorya fischeri
CADNFIAG00010242
N
0.000
Pa_1_10420
Podospora anserina
Pa_1_10420
N
0.000
Pc22g02970
Penicillium chrysogenum
Pc22g02970
N
0.000
PMAA_081480
Penicillium marneffei
PMAA_081480
N
0.000
SS1G_04219
Sclerotinia sclerotiorum
SS1G_04219
N
0.000
TERG_07499
Trichophyton rubrum
TERG_07499
N
0.000
TRV_06656
Trichophyton verrucosum
TRV_06656
N
0.000
UREG_00636
Uncinocarpus reesii
UREG_00636
N
0.000
VDAG_04286
Verticillium dahliae
VDAG_04286
N
0.000