GLRG_01552 (Colletotrichum graminicola)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 GLRG_01552 T01398_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GLRG_01552T0 CCCH ZF 285 308
GLRG_01552T0 CCCH ZF 311 333

Links

Other CCCH ZF family RBPs
Other Colletotrichum graminicola RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDAG_04286 Verticillium dahliae VDAG_04286 N 0.979
fgenesh1_pm.sca_3_chr4_2_0000335 Nectria haematococca fgenesh1_pm.sca_3_chr4_2_0000335 N 0.958
estExt_Genewise1Plus.C_13473 Trichoderma atroviride estExt_Genewise1Plus.C_13473 N 0.958
fgenesh1_pg.C_scaffold_7000377 Trichoderma virens fgenesh1_pg.C_scaffold_7000377 N 0.958
FGSG_12995 Fusarium graminearum FGSG_12995 N 0.958
FVEG_05147 Fusarium verticillioides FVEG_05147 N 0.938
e_gw1.5.87.1 Trichoderma reesei e_gw1.5.87.1 N 0.938
FOXG_01987 Fusarium oxysporum FOXG_01987 N 0.938
SS1G_04219 Sclerotinia sclerotiorum SS1G_04219 N 0.872
BC1G_00189 Botrytis cinerea BC1G_00189 N 0.872
Pa_1_10420 Podospora anserina Pa_1_10420 N 0.854
fgenesh2_pm.1_#_1003 Thielavia terrestris fgenesh2_pm.1_#_1003 N 0.854
NCU07418 Neurospora crassa NCU07418 N 0.851
estExt_Genewise1Plus.C_40825 Neurospora discreta estExt_Genewise1Plus.C_40825 N 0.851
estExt_Genewise1.C_290124 Neurospora tetrasperma estExt_Genewise1.C_290124 N 0.851
ANIA_03578 Aspergillus nidulans CADANIAG00005166 N 0.833
AFLA_051800 Aspergillus flavus CADAFLAG00011171 N 0.812
ATEG_03185 Aspergillus terreus CADATEAG00008323 N 0.812
An01g08600 Aspergillus niger CADANGAG00000860 N 0.812
fgenesh1_pm.00009_#_468 Aspergillus carbonarius fgenesh1_pm.00009_#_468 N 0.812
AO090009000286 Aspergillus oryzae CADAORAG00003756 N 0.812
Pc22g02970 Penicillium chrysogenum Pc22g02970 N 0.796
ACLA_052020 Aspergillus clavatus CADACLAG00005073 N 0.792
MGG_04405 Magnaporthe oryzae MGG_04405 N 0.787
GSTUMT00011195001 Tuber melanosporum GSTUMT00011195001 N 0.776
CIMG_00632 Coccidioides immitis CIMG_00632 N 0.771
AFUA_4G13020 Aspergillus fumigatus CADAFUAG00007954 N 0.771
CPSG_09242 Coccidioides posadasii CPSG_09242 N 0.771
NFIA_103330 Neosartorya fischeri CADNFIAG00010242 N 0.771
UREG_00636 Uncinocarpus reesii UREG_00636 N 0.771
TERG_07499 Trichophyton rubrum TERG_07499 N 0.750
PMAA_081480 Penicillium marneffei PMAA_081480 N 0.750
ARB_00116 Arthroderma benhamiae ARB_00116 N 0.750
TRV_06656 Trichophyton verrucosum TRV_06656 N 0.750
MCYG_01086 Microsporum canis MCYG_01086 N 0.729
e_gw1.6.94.1 Cryphonectria parasitica e_gw1.6.94.1 N 0.729
MGYG_01632 Microsporum gypseum MGYG_01632 N 0.729
BDBG_02229 Blastomyces dermatitidis BDBG_02229 N 0.729
HCAG_07022 Histoplasma capsulatum HCAG_07022 N 0.729