RBM39 (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000003048 T41874_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000003167 RRM 155 223
ENSTGUP00000003167 RRM 252 322
ENSTGUP00000003167 RRM 444 500

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29841.m002811 Ricinus communis 29841.m002811 N 0.000
29848.m004659 Ricinus communis 29848.m004659 N 0.000
A9P992_POPTR Populus trichocarpa POPTR_0006s26750 N 0.000
A9PB85_POPTR Populus trichocarpa POPTR_0001s17280 N 0.000
AT3G15680 Arabidopsis thaliana AT3G15680-TAIR-G N 0.000
AT5G25490 Arabidopsis thaliana AT5G25490-TAIR-G N 0.000
B9GWD5_POPTR Populus trichocarpa POPTR_0003s05990 N 0.000
B9IKV1_POPTR Populus trichocarpa POPTR_0018s01490 N 0.000
BGIOSIBCE006059 Oryza indica BGIOSIBCE006059 N 0.000
BRADI3G07610 Brachypodium distachyon BRADI3G07610 N 0.000
cassava20678.m1 Manihot esculenta cassava20678.m1 N 0.000
cassava25022.valid.m1 Manihot esculenta cassava25022.valid.m1 N 0.000
cassava25023.valid.m1 Manihot esculenta cassava25023.valid.m1 N 0.000
cassava36675.valid.m1 Manihot esculenta cassava36675.valid.m1 N 0.000
cassava8165.valid.m1 Manihot esculenta cassava8165.valid.m1 N 0.000
chr1.CM0442.230.nd Lotus japonicus chr1.CM0442.230.nd N 0.000
Cucsa.096580 Cucumis sativus Cucsa.096580 N 0.000
Cucsa.105250 Cucumis sativus Cucsa.105250 N 0.000
Cucsa.162240 Cucumis sativus Cucsa.162240 N 0.000
Glyma04g07270.1 Glycine max Glyma04g07270.1 N 0.000
Glyma07g03620.1 Glycine max Glyma07g03620.1 N 0.000
Glyma08g22470.1 Glycine max Glyma08g22470.1 N 0.000
GRMZM2G094353 Zea mays GRMZM2G094353 N 0.000
GRMZM2G116079 Zea mays GRMZM2G116079 N 0.000
GRMZM2G404897 Zea mays GRMZM2G404897 N 0.000
GSVIVG00017252001 Vitis vinifera GSVIVG00017252001 N 0.000
GSVIVG00035819001 Vitis vinifera GSVIVG00035819001 N 0.000
LOC_Os02g10920 Oryza sativa LOC_Os02g10920 N 0.000
LOC_Os06g04920 Oryza sativa LOC_Os06g04920 N 0.000
MDP0000240686 Malus x domestica MDP0000240686 N 0.000
MDP0000269288 Malus x domestica MDP0000269288 N 0.000
MDP0000876872 Malus x domestica MDP0000876872 N 0.000
Medtr3g136630 Medicago truncatula Medtr3g136630 N 0.000
ppa012687m Prunus persica ppa012687m N 0.000
ppa012737m Prunus persica ppa012737m N 0.000
Sb04g007110 Sorghum bicolor Sb04g007110 N 0.000
SB10G002790 Sorghum bicolor Sb10g002790 N 0.000
XM_002872121.1 Arabidopsis lyrata fgenesh2_kg.6__2541__AT5G25490.1 N 0.000
XM_002882911.1 Arabidopsis lyrata fgenesh2_kg.3__1723__AT3G15680.1 N 0.000