RBM39 (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000003048 T41874_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000003167 RRM 155 223
ENSTGUP00000003167 RRM 252 322
ENSTGUP00000003167 RRM 444 500

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
114532 Helobdella robusta 114532 N 0.702
AAEL005046 Aedes aegypti AAEL005046 N 0.766
AAH75146 Xenopus laevis AAH75146 N 0.949
AAH77813 Xenopus laevis AAH77813 N 0.955
AGAP008433 Anopheles gambiae AGAP008433 N 0.749
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.769
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.995
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.995
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.995
CG11266 Drosophila melanogaster FBgn0031883 N 0.737
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.778
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.778
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.778
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.778
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.740
ENSCPOG00000021775 Cavia porcellus ENSCPOG00000021775 N 0.884
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.995
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.763
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.768
e_gw.57.85.1 Branchiostoma floridae e_gw.57.85.1 N 0.712
fgenesh1_pg.scaffold_245000036 Nematostella vectensis fgenesh1_pg.scaffold_245000036 N 0.704
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.732
GD23448 Drosophila simulans FBgn0194830 N 0.737
GE14328 Drosophila yakuba FBgn0231943 N 0.742
GF14957 Drosophila ananassae FBgn0091982 N 0.737
GG10454 Drosophila erecta FBgn0102763 N 0.737
GH13506 Drosophila grimshawi FBgn0120982 N 0.735
GI10246 Drosophila mojavensis FBgn0133011 N 0.729
GJ18017 Drosophila virilis FBgn0205182 N 0.716
GK15272 Drosophila willistoni FBgn0217277 N 0.744
GM16278 Drosophila sechellia FBgn0171194 N 0.737
PHUM394230 Pediculus humanus PHUM394230 N 0.774
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.995
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.898
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.864
RBM23 Tetraodon nigroviridis ENSTNIG00000005223 N 0.807
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.893
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.883
RBM23 Oryzias latipes ENSORLG00000009919 N 0.914
RBM23 Oryzias latipes ENSORLG00000010370 N 0.893
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.995
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.995
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.995
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.960
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.995
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.995
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.970
RBM39 Gallus gallus ENSGALG00000001550 N 1.000
RBM39 Homo sapiens ENSG00000131051 N 0.995
RBM39 Echinops telfairi ENSETEG00000016295 N 0.884
RBM39 Equus caballus ENSECAG00000013423 N 0.995
RBM39 Dasypus novemcinctus ENSDNOG00000025219 N 0.758
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.925
RBM39 Microcebus murinus ENSMICG00000001668 N 0.995
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.985
Rbm39 Mus musculus ENSMUSG00000027620 N 0.995
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.864
RBM39 Sus scrofa ENSSSCG00000007309 N 0.995
RBM39 Sorex araneus ENSSARG00000007673 N 0.995
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.995
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.995
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.995
RBM39 Procavia capensis ENSPCAG00000008764 N 0.884
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.919
RBM39 Canis familiaris ENSCAFG00000008327 N 0.995
rbm39a Danio rerio ENSDARG00000011613 N 0.909
rbm39b Danio rerio ENSDARG00000041853 N 0.904