CNOT4 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000016861 T42366_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CNOT4
M147_0.6 		Homo sapiens GACAGA RNAcompete
Ray et al.(2013)
RNCMPT00156 		0.987
e_gw.71.47.1
M233_0.6 		Nematostella vectensis AGAYASA RNAcompete
Ray et al.(2013)
RNCMPT00278 		0.753
Cnot4
M008_0.6 		Drosophila melanogaster ASACAHW RNAcompete
Ray et al.(2013)
RNCMPT00008 		0.714
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000043205 RRM 111 187
ENSTRUP00000043206 RRM 111 187
ENSTRUP00000043207 RRM 111 187

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSGACG00000019980 Gasterosteus aculeatus ENSGACG00000019980 I 0.000
ENSORLG00000011589 Oryzias latipes ENSORLG00000011589 I 0.000
ENSTNIG00000005668 Tetraodon nigroviridis ENSTNIG00000005668 I 0.000
ENSTRUG00000010623 Takifugu rubripes ENSTRUG00000010623 I 0.000
rbm4.3 Danio rerio ENSDARG00000022129 D 0.000