GP3.076550 (Batrachochytrium dendrobatidis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GP3.076550 T53024_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
GP3.076550 RRM 226 295

Links

Other RRM family RBPs
Other Batrachochytrium dendrobatidis RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
76581 Helobdella robusta 76581 I 0.704
CBG21313 Caenorhabditis briggsae CBG21313 I 0.704
CBN12017 Caenorhabditis brenneri CBN12017 I 0.704
CJA09414 Caenorhabditis japonica CJA09414 I 0.704
CRE29329 Caenorhabditis remanei CRE29329 I 0.704
ENSXETG00000017599 Xenopus tropicalis ENSXETG00000017599 D 0.704
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.746
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.746
estExt_Genewise1Plus.C_1180017 Capitella teleta estExt_Genewise1Plus.C_1180017 I 0.718
e_gw1.1.2297.1 Mucor circinelloides e_gw1.1.2297.1 N 0.732
e_gw1.16.225.1 Lottia gigantea e_gw1.16.225.1 I 0.718
fgenesh1_pg.C_scaffold_23000018 Phytophthora capsici fgenesh1_pg.C_scaffold_23000018 N 0.704
Ppa-tag-262 Pristionchus pacificus PPA14507 I 0.704
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.704
RBM42 Oryzias latipes ENSORLG00000003387 I 0.704
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.704
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.704
RO3G_12779 Rhizopus oryzae RO3G_12779 N 0.718
SPPG_03010 Spizellomyces punctatus SPPG_03010 I 0.789
s_467614 Phytophthora sojae s_467614 N 0.704
tag-262 Caenorhabditis elegans Y54H5A.3 I 0.704
XP_002167334.1 Hydra magnipapillata XP_002167334.1 I 0.732