estExt_fgenesh1_pg.C_210283 (Phytophthora capsici)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 estExt_fgenesh1_pg.C_210283 T61504_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.816
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_210283 S1 1 68

Links

Other S1 family RBPs
Other Phytophthora capsici RBPs

243 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
114622 Helobdella robusta 114622 I 0.787
29607.m000238 Ricinus communis 29607.m000238 I 0.724
69770 Aureococcus anophagefferens 69770 I 0.853
72304 Aureococcus anophagefferens 72304 I 0.853
AAH46576 Xenopus laevis AAH46576 I 0.827
ACLA_041660 Aspergillus clavatus CADACLAG00004024 I 0.776
AFLA_020350 Aspergillus flavus CADAFLAG00003920 I 0.776
AMAG_01618 Allomyces macrogynus AMAG_01618 I 0.773
AMAG_04113 Allomyces macrogynus AMAG_04113 I 0.773
amel4_ncbi_hmm23817 Apis mellifera amel4_ncbi_hmm23817 I 0.829
Ame_R013633 Ailuropoda melanoleuca Ame_R013633 I 0.840
AMSG_04936 Thecamonas trahens AMSG_04936 I 0.827
ANIA_03156 Aspergillus nidulans CADANIAG00009914 I 0.776
ARB_05709 Arthroderma benhamiae ARB_05709 I 0.787
AT2G40290 Arabidopsis thaliana AT2G40290-TAIR-G I 0.724
ATEG_04051 Aspergillus terreus CADATEAG00009463 I 0.776
B9HHU6_POPTR Populus trichocarpa POPTR_0008s07250 I 0.724
B9HSK1_POPTR Populus trichocarpa POPTR_0010s19230 I 0.724
BC1G_14334 Botrytis cinerea BC1G_14334 I 0.789
BDBG_06604 Blastomyces dermatitidis BDBG_06604 I 0.789
BGIBMGA004302 Bombyx mori BGIBMGA004302 I 0.829
BGIOSIBCE010732 Oryza indica BGIOSIBCE010732 I 0.000
BGIOSIBCE026135 Oryza indica BGIOSIBCE026135 I 0.000
Bm1_04900 Brugia malayi Bm1_04900 I 0.813
BRADI1G16700 Brachypodium distachyon BRADI1G16700 I 0.707
BRADI1G65210 Brachypodium distachyon BRADI1G65210 N 0.000
CAOG_02542 Capsaspora owczarzaki CAOG_02542 I 0.792
cassava16515.m1 Manihot esculenta cassava16515.m1 I 0.733
cassava7658.valid.m1 Manihot esculenta cassava7658.valid.m1 I 0.737
cassava7659.valid.m1 Manihot esculenta cassava7659.valid.m1 I 0.737
CBG22041 Caenorhabditis briggsae CBG22041 I 0.000
CBN03344 Caenorhabditis brenneri CBN03344 I 0.000
CBN09310 Caenorhabditis brenneri CBN09310 I 0.000
CC1G_08524 Coprinopsis cinerea CC1G_08524 I 0.776
CHGG_04762 Chaetomium globosum CHGG_04762 I 0.776
CIMG_00109 Coccidioides immitis CIMG_00109 I 0.789
CPSG_04829 Coccidioides posadasii CPSG_04829 I 0.789
CRE03750 Caenorhabditis remanei CRE03750 I 0.000
Cucsa.239320 Cucumis sativus Cucsa.239320 I 0.724
EDP42051.1 Malassezia globosa EDP42051.1 I 0.776
EIF2 Arabidopsis thaliana AT5G05470-TAIR-G I 0.720
EIF2S1 Ornithorhynchus anatinus ENSOANG00000005409 I 0.840
Eif2s1 Mus musculus ENSMUSG00000021116 I 0.840
EIF2S1 Monodelphis domestica ENSMODG00000009911 I 0.840
EIF2S1 Macaca mulatta ENSMMUG00000021419 I 0.840
EIF2S1 Microcebus murinus ENSMICG00000010793 I 0.840
EIF2S1 Meleagris gallopavo ENSMGAG00000011974 I 0.840
EIF2S1 Loxodonta africana ENSLAFG00000013423 I 0.840
EIF2S1 Gorilla gorilla ENSGGOG00000001603 I 0.840
EIF2S1 Gasterosteus aculeatus ENSGACG00000008569 I 0.840
EIF2S1 Ochotona princeps ENSOPRG00000004520 I 0.840
EIF2S1 Procavia capensis ENSPCAG00000002613 I 0.840
EIF2S1 Pan troglodytes ENSPTRG00000006462 I 0.840
EIF2S1 Oryzias latipes ENSORLG00000011844 I 0.840
EIF2S1 Tursiops truncatus ENSTTRG00000015806 I 0.840
EIF2S1 Takifugu rubripes ENSTRUG00000017958 I 0.840
EIF2S1 Tetraodon nigroviridis ENSTNIG00000012223 I 0.840
EIF2S1 Taeniopygia guttata ENSTGUG00000011542 I 0.840
EIF2S1 Spermophilus tridecemlineatus ENSSTOG00000001565 I 0.840
EIF2S1 Sus scrofa ENSSSCG00000002289 I 0.840
EIF2S1 Sorex araneus ENSSARG00000011682 I 0.840
Eif2s1 Rattus norvegicus ENSRNOG00000009432 I 0.840
EIF2S1 Homo sapiens ENSG00000134001 I 0.840
EIF2S1 Echinops telfairi ENSETEG00000019003 I 0.840
EIF2S1 Erinaceus europaeus ENSEEUG00000010225 I 0.840
EIF2S1 Anolis carolinensis ENSACAG00000005994 I 0.840
EIF2S1 Canis familiaris ENSCAFG00000016386 I 0.840
EIF2S1 Cavia porcellus ENSCPOG00000003313 I 0.840
eif2s1 Danio rerio ENSDARG00000052178 I 0.840
Eif2s1 Dipodomys ordii ENSDORG00000002382 I 0.840
eif2s1l Danio rerio ENSDARG00000005827 I 0.840
ENSCHOG00000009030 Choloepus hoffmanni ENSCHOG00000009030 I 0.827
ENSPPYG00000005921 Pongo pygmaeus ENSPPYG00000005921 I 0.840
estExt_fgenesh1_kg.C_10157 Myceliophthora thermophila estExt_fgenesh1_kg.C_10157 I 0.776
estExt_fgenesh1_kg.C_130002 Sporobolomyces roseus estExt_fgenesh1_kg.C_130002 I 0.773
estExt_fgenesh1_kg.C_70012 Micromonas pusilla estExt_fgenesh1_kg.C_70012 I 0.747
estExt_fgenesh1_pg.C_20141 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_20141 I 0.789
estExt_fgenesh1_pg.C_Chr_02.00010078 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_02.00010078 I 0.747
estExt_fgenesh1_pm.C_210071 Selaginella moellendorfii estExt_fgenesh1_pm.C_210071 I 0.787
estExt_fgenesh1_pm.C_chr_100036 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_100036 I 0.789
estExt_fgenesh2_kg.C_20112 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_20112 I 0.803
estExt_fgenesh2_kg.C_21286 Serpula lacrymans estExt_fgenesh2_kg.C_21286 I 0.789
estExt_fgenesh2_kg.C_40048 Neurospora tetrasperma estExt_fgenesh2_kg.C_40048 I 0.776
estExt_fgenesh2_pm.C_120283 Heterobasidion annosum estExt_fgenesh2_pm.C_120283 I 0.803
estExt_fgenesh2_pm.C_1660010 Branchiostoma floridae estExt_fgenesh2_pm.C_1660010 I 0.840
estExt_fgenesh2_pm.C_5760005 Branchiostoma floridae estExt_fgenesh2_pm.C_5760005 I 0.840
estExt_fgenesh2_pm.C_sca_10068 Lottia gigantea estExt_fgenesh2_pm.C_sca_10068 I 0.800
estExt_fgenesh3_kg.C_30291 Neurospora discreta estExt_fgenesh3_kg.C_30291 I 0.776
estExt_fgenesh4_pg.C_220183 Volvox carteri estExt_fgenesh4_pg.C_220183 I 0.776
estExt_Genewise1.C_100122 Postia placenta estExt_Genewise1.C_100122 I 0.803
estExt_Genewise1.C_100332 Chlorella vulgaris estExt_Genewise1.C_100332 I 0.789
estExt_Genewise1.C_100430 Trichoderma atroviride estExt_Genewise1.C_100430 I 0.789
estExt_Genewise1.C_10111 Trichoderma reesei estExt_Genewise1.C_10111 I 0.789
estExt_Genewise1.C_110295 Coccomyxa C 169 estExt_Genewise1.C_110295 I 0.789
estExt_Genewise1.C_21511 Trichoderma virens estExt_Genewise1.C_21511 I 0.789
estExt_Genewise1.C_30452 Schizophyllum commune estExt_Genewise1.C_30452 I 0.776
estExt_Genewise1.C_51162 Mucor circinelloides estExt_Genewise1.C_51162 I 0.747
estExt_Genewise1Plus.C_10999 Thielavia terrestris estExt_Genewise1Plus.C_10999 I 0.776
estExt_Genewise1Plus.C_230113 Phycomyces blakesleeanus estExt_Genewise1Plus.C_230113 I 0.733
estExt_Genewise1Plus.C_2350006 Capitella teleta estExt_Genewise1Plus.C_2350006 I 0.800
estExt_Genewise1Plus.C_sca_18_chr2_1_00859 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00859 I 0.789
estExt_GenewiseH_1.C_750056 Nematostella vectensis estExt_GenewiseH_1.C_750056 I 0.829
estExt_gwp_gw1.C_3520018 Physcomitrella patens estExt_gwp_gw1.C_3520018 I 0.750
e_gw.114.57.1 Nematostella vectensis e_gw.114.57.1 I 0.829
e_gw1.18.114.1 Tremella mesenterica e_gw1.18.114.1 I 0.724
e_gw1.2.367.1 Ostreococcus RCC809 e_gw1.2.367.1 I 0.771
e_gw1.3.2112.1 Cryphonectria parasitica e_gw1.3.2112.1 I 0.776
e_gwEuk.2.353.1 Ostreococcus lucimarinus e_gwEuk.2.353.1 I 0.733
e_gwh1.12.106.1 Laccaria bicolor e_gwh1.12.106.1 I 0.776
e_gwW.11.341.1 Chlamydomonas reinhardtii e_gwW.11.341.1 I 0.789
e_gww2.12.213.1 Phanerochaete chrysosporium e_gww2.12.213.1 I 0.803
fgenesh1_pg.C_scaffold_2000543 Melampsora laricis populina fgenesh1_pg.C_scaffold_2000543 I 0.760
fgenesh1_pg.scaffold_55000187 Physcomitrella patens fgenesh1_pg.scaffold_55000187 I 0.763
fgenesh1_pm.00077_#_3 Aspergillus carbonarius fgenesh1_pm.00077_#_3 I 0.776
fgenesh1_pm.C_scaffold_10000060 Batrachochytrium dendrobatidis fgenesh1_pm.C_scaffold_10000060 I 0.829
fgenesh1_pm.C_scaffold_69000005 Phytophthora ramorum fgenesh1_pm.C_scaffold_69000005 I 0.907
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 Emiliania huxleyi fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 I 0.827
FGSG_06220 Fusarium graminearum FGSG_06220 I 0.776
FOXG_08491 Fusarium oxysporum FOXG_08491 I 0.789
FVEG_06185 Fusarium verticillioides FVEG_06185 I 0.789
genemark.2222_g Pleurotus ostreatus genemark.2222_g I 0.803
GLRG_02833 Colletotrichum graminicola GLRG_02833 I 0.789
Glyma11g35600.1 Glycine max Glyma11g35600.1 I 0.724
Glyma18g02820.1 Glycine max Glyma18g02820.1 I 0.724
GRMZM2G058138 Zea mays GRMZM2G058138 I 0.000
GRMZM2G083262 Zea mays GRMZM2G083262 I 0.000
GSTUMT00002346001 Tuber melanosporum GSTUMT00002346001 I 0.776
GSVIVG00024676001 Vitis vinifera GSVIVG00024676001 I 0.724
HCAG_01136 Histoplasma capsulatum HCAG_01136 I 0.800
IF2A_BOVIN Bos taurus ENSBTAG00000016311 I 0.840
IF2A_CHICK Gallus gallus ENSGALG00000009565 I 0.840
IF2A_RABIT Oryctolagus cuniculus ENSOCUG00000012023 I 0.840
IGS.gm_12_00191 Chlorella NC64A IGS.gm_12_00191 I 0.787
ISCW017360 Ixodes scapularis ISCW017360 I 0.789
KLLA0A11814g Kluyveromyces lactis KLLA0A11814g I 0.813
KLTH0B02002g Kluyveromyces thermotolerans KLTH0B02002g I 0.789
Kwal_15422 Kluyveromyces waltii Kwal_15422 I 0.789
LjSGA_031492.1 Lotus japonicus LjSGA_031492.1 I 0.724
LOAG_09556 Loa loa LOAG_09556 I 0.813
LOC100052709 Equus caballus ENSECAG00000018424 I 0.840
LOC100399114 Callithrix jacchus ENSCJAG00000015368 I 0.840
LOC_Os03g18510 Oryza sativa LOC_Os03g18510 I 0.000
LOC_Os07g49220 Oryza sativa LOC_Os07g49220 I 0.000
MCYG_00123 Microsporum canis MCYG_00123 I 0.787
MDP0000155133 Malus x domestica MDP0000155133 I 0.733
MDP0000663428 Malus x domestica MDP0000663428 I 0.724
MDP0000674982 Malus x domestica MDP0000674982 N 0.000
MDP0000951954 Malus x domestica MDP0000951954 N 0.000
Medtr3g094720 Medicago truncatula Medtr3g094720 I 0.737
Medtr3g094730 Medicago truncatula Medtr3g094730 I 0.724
Medtr3g094740 Medicago truncatula Medtr3g094740 I 0.724
mgf006782m Mimulus guttatus mgf006782m I 0.724
MGG_13200 Magnaporthe oryzae MGG_13200 I 0.763
MGYG_00686 Microsporum gypseum MGYG_00686 I 0.787
nasonia_NCBI_hmm338664 Nasonia vitripennis nasonia_NCBI_hmm338664 I 0.829
NCLIV_056550 Neospora caninum NCLIV_056550 I 0.720
NCU08277 Neurospora crassa NCU08277 I 0.776
NFIA_063860 Neosartorya fischeri CADNFIAG00005762 I 0.776
PASA_GEN_0500123 Daphnia pulex PASA_GEN_0500123 I 0.829
Pa_6_5980 Podospora anserina Pa_6_5980 I 0.776
PHATRDRAFT_34538 Phaeodactylum tricornutum Phatr34538 I 0.803
PHUM551010 Pediculus humanus PHUM551010 I 0.816
PITG_07885 Phytophthora infestans PITG_07885 I 0.907
PK10564.1 Cannabis sativa PK10564.1 I 0.724
PMAA_021520 Penicillium marneffei PMAA_021520 I 0.776
ppa008120m Prunus persica ppa008120m I 0.724
PredSwiss_EST393.1 Pneumocystis carinii PredSwiss_EST393.1 I 0.789
Q7ZTK4 Xenopus laevis Q7ZTK4 I 0.827
RO3G_12494 Rhizopus oryzae RO3G_12494 I 0.747
RO3G_13185 Rhizopus oryzae RO3G_13185 I 0.747
SB01G038230 Sorghum bicolor Sb01g038230 I 0.000
SPPG_00622 Spizellomyces punctatus SPPG_00622 I 0.840
TEQG_01370 Trichophyton equinum TEQG_01370 I 0.787
TERG_00559 Trichophyton rubrum TERG_00559 I 0.787
TESG_05324 Trichophyton tonsurans TESG_05324 I 0.787
TGGT1_089620 Toxoplasma gondii TGGT1_089620 I 0.720
TGME49_113230 Toxoplasma gondii TGME49_113230 I 0.720
TGVEG_097260 Toxoplasma gondii TGVEG_097260 I 0.720
THAPSDRAFT_105 Thalassiosira pseudonana Thaps105 I 0.816
TRV_03711 Trichophyton verrucosum TRV_03711 I 0.787
UM01463 Ustilago maydis UM01463 I 0.750
UREG_00217 Uncinocarpus reesii UREG_00217 I 0.776
VDAG_01930 Verticillium dahliae VDAG_01930 I 0.789
VDBG_01622 Verticillium albo atrum VDBG_01622 I 0.789
WUBG_12485 Wuchereria bancrofti WUBG_12485 I 0.813
XM_002881666.1 Arabidopsis lyrata fgenesh2_kg.4__2141__AT2G40290.1 I 0.724
XP_002156465.1 Hydra magnipapillata XP_002156465.1 I 0.813
Y37E3.10 Caenorhabditis elegans Y37E3.10 I 0.000
YALI0B01034g Yarrowia lipolytica YALI0B01034g I 0.737