CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MCYG_01086
(
Microsporum canis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
MCYG_01086
T01443_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_01086T0
CCCH ZF
275
299
TPVVCKYWLSTGQCLRMDCRFSHDL
MCYG_01086T0
CCCH ZF
303
324
VCKYWLMGNCLAGESCPFSHDP
Links
Other
CCCH ZF
family RBPs
Other
Microsporum canis
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_00116
Arthroderma benhamiae
ARB_00116
N
0.979
fgenesh1_pm.00009_#_468
Aspergillus carbonarius
fgenesh1_pm.00009_#_468
N
0.872
ACLA_052020
Aspergillus clavatus
CADACLAG00005073
N
0.894
AFLA_051800
Aspergillus flavus
CADAFLAG00011171
N
0.872
AFUA_4G13020
Aspergillus fumigatus
CADAFUAG00007954
N
0.894
ANIA_03578
Aspergillus nidulans
CADANIAG00005166
N
0.854
An01g08600
Aspergillus niger
CADANGAG00000860
N
0.872
AO090009000286
Aspergillus oryzae
CADAORAG00003756
N
0.872
ATEG_03185
Aspergillus terreus
CADATEAG00008323
N
0.872
BDBG_02229
Blastomyces dermatitidis
BDBG_02229
N
0.872
BC1G_00189
Botrytis cinerea
BC1G_00189
N
0.787
CIMG_00632
Coccidioides immitis
CIMG_00632
N
0.894
CPSG_09242
Coccidioides posadasii
CPSG_09242
N
0.894
GLRG_01552
Colletotrichum graminicola
GLRG_01552
N
0.729
e_gw1.6.94.1
Cryphonectria parasitica
e_gw1.6.94.1
N
0.000
FGSG_12995
Fusarium graminearum
FGSG_12995
N
0.750
FVEG_05147
Fusarium verticillioides
FVEG_05147
N
0.729
HCAG_07022
Histoplasma capsulatum
HCAG_07022
N
0.851
MGG_04405
Magnaporthe oryzae
MGG_04405
N
0.702
MGYG_01632
Microsporum gypseum
MGYG_01632
N
1.000
fgenesh1_pm.sca_3_chr4_2_0000335
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000335
N
0.750
NFIA_103330
Neosartorya fischeri
CADNFIAG00010242
N
0.894
NCU07418
Neurospora crassa
NCU07418
N
0.723
estExt_Genewise1Plus.C_40825
Neurospora discreta
estExt_Genewise1Plus.C_40825
N
0.723
estExt_Genewise1.C_290124
Neurospora tetrasperma
estExt_Genewise1.C_290124
N
0.723
PABG_03020
Paracoccidioides brasiliensis
PABG_03020
N
0.872
Pc22g02970
Penicillium chrysogenum
Pc22g02970
N
0.857
PMAA_081480
Penicillium marneffei
PMAA_081480
N
0.872
Pa_1_10420
Podospora anserina
Pa_1_10420
N
0.745
SS1G_04219
Sclerotinia sclerotiorum
SS1G_04219
N
0.787
fgenesh2_pm.1_#_1003
Thielavia terrestris
fgenesh2_pm.1_#_1003
N
0.766
estExt_Genewise1Plus.C_13473
Trichoderma atroviride
estExt_Genewise1Plus.C_13473
N
0.750
e_gw1.5.87.1
Trichoderma reesei
e_gw1.5.87.1
N
0.750
fgenesh1_pg.C_scaffold_7000377
Trichoderma virens
fgenesh1_pg.C_scaffold_7000377
N
0.750
TERG_07499
Trichophyton rubrum
TERG_07499
N
0.979
TRV_06656
Trichophyton verrucosum
TRV_06656
N
0.979
GSTUMT00011195001
Tuber melanosporum
GSTUMT00011195001
N
0.740
UREG_00636
Uncinocarpus reesii
UREG_00636
N
0.894
VDAG_04286
Verticillium dahliae
VDAG_04286
N
0.729