CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
NFIA_073040
(
Neosartorya fischeri
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CADNFIAG00007899
T02094_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADNFIAP00007732
CCCH ZF
86
111
PKTVLCVFYKQGNCEKGKKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Neosartorya fischeri
RBPs
133 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCU09048
Neurospora crassa
NCU09048
N
0.000
e_gw1.8.500.1
Neurospora discreta
e_gw1.8.500.1
N
0.000