GSPATP00002790001 (Paramecium tetraurelia)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 GSPATP00002790001 T06163_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSPATP00002790001 CCCH ZF 93 118
GSPATP00002790001 CCCH ZF 184 203

Links

Other CCCH ZF family RBPs
Other Paramecium tetraurelia RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.000
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.000
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.000
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.000
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.000
An08g01040 Aspergillus niger CADANGAG00006423 N 0.000
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.000
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.000
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.000
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.000
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.000
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.000
estExt_Genewise1.C_100240 Cochliobolus heterostrophus C5 estExt_Genewise1.C_100240 N 0.000
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.000
CC1G_14585 Coprinopsis cinerea CC1G_14585 N 0.000
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.000
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.000
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.000
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.000
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.000
e_gw1.4.778.1 Heterobasidion annosum e_gw1.4.778.1 N 0.000
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.000
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.000
EDP44971.1 Malassezia globosa EDP44971.1 N 0.000
MCYG_08495 Microsporum canis MCYG_08495 N 0.000
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.000
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.000
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.000
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.000
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.000
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.000
NCU03946 Neurospora crassa NCU03946 N 0.000
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.000
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.000
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.000
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.000
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.000
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.000
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.000
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.000
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.000
Pa_4_2600 Podospora anserina Pa_4_2600 N 0.000
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.000
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.000
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.000
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.000
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.000
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.000
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.000
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.000
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.000
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.000
TERG_02884 Trichophyton rubrum TERG_02884 N 0.000
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.000
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.000
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.000
UM02401 Ustilago maydis UM02401 N 0.000
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.000
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.000