GM24938 (Drosophila sechellia)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 FBgn0179800 T17095_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0206415 CSD 183 248
FBpp0206415 CSD 271 334
FBpp0206415 CSD 342 410
FBpp0206415 CSD 514 581
FBpp0206415 CSD 760 821
FBpp0206415 CSD 919 985

Links

Other CSD family RBPs
Other Drosophila sechellia RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.000
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.000
PK01720.1 Cannabis sativa PK01720.1 N 0.000
Glyma12g28690.1 Glycine max Glyma12g28690.1 N 0.000
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.000
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.000
MDP0000077749 Malus x domestica MDP0000077749 N 0.000
MDP0000077753 Malus x domestica MDP0000077753 N 0.000
MDP0000268130 Malus x domestica MDP0000268130 N 0.000
cassava15324.m1 Manihot esculenta cassava15324.m1 N 0.000
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.000
cassava13309.valid.m1 Manihot esculenta cassava13309.valid.m1 N 0.000
cassava13308.valid.m1 Manihot esculenta cassava13308.valid.m1 N 0.000
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.000
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.000
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.000
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.000
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.000
PDK_20s1559651g001 Phoenix dactylifera PDK_20s1559651g001 N 0.000
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.000
B9N0F3_POPTR Populus trichocarpa POPTR_0004s23460 N 0.000
A9PGC0_POPTR Populus trichocarpa POPTR_0011s17110 N 0.000
A9PGS1_POPTR Populus trichocarpa POPTR_0022s00450 N 0.000
ppa009432m Prunus persica ppa009432m N 0.000
29765.m000727 Ricinus communis 29765.m000727 N 0.000
28128.m000156 Ricinus communis 28128.m000156 N 0.000
SB09G020640 Sorghum bicolor Sb09g020640 N 0.000
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.000
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.000
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.000