BGIOSIBCE024206 (Oryza indica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 BGIOSIBCE024206 T18134_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE024206 KH 140 216

Links

Other KH family RBPs
Other Oryza indica RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.987
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.889
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.864
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.815
SB02G006770 Sorghum bicolor Sb02g006770 N 0.800
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.790
mgf011994m Mimulus guttatus mgf011994m N 0.785
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.779
BGIOSIBCE004076 Oryza indica BGIOSIBCE004076 N 0.776
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.769
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.765
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.759
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.753
GRMZM2G093006 Zea mays GRMZM2G093006 N 0.753
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.753
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.753
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.753
AC218972.3_FG007 Zea mays AC218972.3_FG007 N 0.753
SB03G038070 Sorghum bicolor Sb03g038070 N 0.753
SB01G003680 Sorghum bicolor Sb01g003680 N 0.744
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.741
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.741
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.740
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.732
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.732
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.732
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.732
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.732
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.728
29945.m000086 Ricinus communis 29945.m000086 N 0.727
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.726
cassava15324.m1 Manihot esculenta cassava15324.m1 N 0.726
SB09G023640 Sorghum bicolor Sb09g023640 N 0.726
cassava13309.valid.m1 Manihot esculenta cassava13309.valid.m1 N 0.726
cassava13308.valid.m1 Manihot esculenta cassava13308.valid.m1 N 0.726
MDP0000300654 Malus x domestica MDP0000300654 N 0.725
MDP0000501473 Malus x domestica MDP0000501473 N 0.720
MDP0000119110 Malus x domestica MDP0000119110 N 0.720
PK23097.1 Cannabis sativa PK23097.1 N 0.720
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.720
MDP0000077749 Malus x domestica MDP0000077749 N 0.716
ppa009432m Prunus persica ppa009432m N 0.716
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.716
SB09G020640 Sorghum bicolor Sb09g020640 N 0.716
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.714
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.714
27955.m000377 Ricinus communis 27955.m000377 N 0.714
MDP0000665847 Malus x domestica MDP0000665847 N 0.711
MDP0000186494 Malus x domestica MDP0000186494 N 0.711
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.709
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.707
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.706
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.706
28128.m000156 Ricinus communis 28128.m000156 N 0.701