cassava13308.valid.m1 (Manihot esculenta)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 cassava13308.valid.m1 T20648_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava13308.valid.m1 KH 143 226

Links

Other KH family RBPs
Other Manihot esculenta RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava13309.valid.m1 Manihot esculenta cassava13309.valid.m1 N 1.000
cassava15324.m1 Manihot esculenta cassava15324.m1 N 1.000
PK01720.1 Cannabis sativa PK01720.1 N 0.941
A9PGS1_POPTR Populus trichocarpa POPTR_0022s00450 N 0.930
B9N0F3_POPTR Populus trichocarpa POPTR_0004s23460 N 0.929
MDP0000077749 Malus x domestica MDP0000077749 N 0.929
29765.m000727 Ricinus communis 29765.m000727 N 0.919
Glyma12g28690.1 Glycine max Glyma12g28690.1 N 0.918
ppa009432m Prunus persica ppa009432m N 0.917
MDP0000300654 Malus x domestica MDP0000300654 N 0.917
SB09G020640 Sorghum bicolor Sb09g020640 N 0.845
PDK_20s1559651g001 Phoenix dactylifera PDK_20s1559651g001 N 0.800
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.788
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.774
MDP0000077753 Malus x domestica MDP0000077753 N 0.762
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.762
MDP0000268130 Malus x domestica MDP0000268130 N 0.762
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.738
A9PGC0_POPTR Populus trichocarpa POPTR_0011s17110 N 0.729
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.726
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.726
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.726
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.714
mgf020149m Mimulus guttatus mgf020149m N 0.709
AC218972.3_FG007 Zea mays AC218972.3_FG007 N 0.706
POPTR_0001s47500 Populus trichocarpa POPTR_0001s47500 N 0.706