BRADI1G04120 (Brachypodium distachyon)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 BRADI1G04120 T18146_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G04120.1 KH 140 218
BRADI1G04120.2 KH 139 217

Links

Other KH family RBPs
Other Brachypodium distachyon RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.886
SB01G003680 Sorghum bicolor Sb01g003680 N 0.838
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.825
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.812
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.807
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.802
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.800
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.790
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.790
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.785
SB02G006770 Sorghum bicolor Sb02g006770 N 0.785
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.765
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.759
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.750
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.750
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.747
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.747
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.741
MDP0000077749 Malus x domestica MDP0000077749 N 0.741
ppa009432m Prunus persica ppa009432m N 0.741
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.738
MDP0000501473 Malus x domestica MDP0000501473 N 0.738
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.738
MDP0000119110 Malus x domestica MDP0000119110 N 0.738
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.735
mgf011994m Mimulus guttatus mgf011994m N 0.734
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.734
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.733
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.733
MDP0000300654 Malus x domestica MDP0000300654 N 0.728
SB09G020640 Sorghum bicolor Sb09g020640 N 0.728
cassava15324.m1 Manihot esculenta cassava15324.m1 N 0.726
cassava13309.valid.m1 Manihot esculenta cassava13309.valid.m1 N 0.726
cassava13308.valid.m1 Manihot esculenta cassava13308.valid.m1 N 0.726
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.726
PK23097.1 Cannabis sativa PK23097.1 N 0.725
SB09G023640 Sorghum bicolor Sb09g023640 N 0.723
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.723
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.722
29765.m000727 Ricinus communis 29765.m000727 N 0.721
B9N0F3_POPTR Populus trichocarpa POPTR_0004s23460 N 0.718
MDP0000186494 Malus x domestica MDP0000186494 N 0.716
MDP0000665847 Malus x domestica MDP0000665847 N 0.716
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.713
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.711
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.711
mgf005196m Mimulus guttatus mgf005196m N 0.711
29945.m000086 Ricinus communis 29945.m000086 N 0.709
27955.m000377 Ricinus communis 27955.m000377 N 0.707
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.706
GRMZM2G093006 Zea mays GRMZM2G093006 N 0.706
SB03G038070 Sorghum bicolor Sb03g038070 N 0.706
AC218972.3_FG007 Zea mays AC218972.3_FG007 N 0.706
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.706
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.704