BRADI1G53760 (Brachypodium distachyon)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 BRADI1G53760 T18151_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G53760.1 KH 139 219
BRADI1G53760.2 KH 92 172
BRADI1G53760.4 KH 135 215
BRADI1G53760.5 KH 135 215

Links

Other KH family RBPs
Other Brachypodium distachyon RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.914
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.889
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.877
SB02G006770 Sorghum bicolor Sb02g006770 N 0.827
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.802
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.802
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.802
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.776
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.770
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.765
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.765
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.765
SB01G003680 Sorghum bicolor Sb01g003680 N 0.756
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.753
MDP0000077749 Malus x domestica MDP0000077749 N 0.753
ppa009432m Prunus persica ppa009432m N 0.753
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.753
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.744
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.744
AC218972.3_FG007 Zea mays AC218972.3_FG007 N 0.741
SB03G038070 Sorghum bicolor Sb03g038070 N 0.741
GRMZM2G093006 Zea mays GRMZM2G093006 N 0.741
SB09G020640 Sorghum bicolor Sb09g020640 N 0.741
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.741
MDP0000300654 Malus x domestica MDP0000300654 N 0.741
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.738
cassava15324.m1 Manihot esculenta cassava15324.m1 N 0.738
SB09G023640 Sorghum bicolor Sb09g023640 N 0.738
cassava13308.valid.m1 Manihot esculenta cassava13308.valid.m1 N 0.738
cassava13309.valid.m1 Manihot esculenta cassava13309.valid.m1 N 0.738
A9PGS1_POPTR Populus trichocarpa POPTR_0022s00450 N 0.733
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.732
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.732
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.732
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.729
B9N0F3_POPTR Populus trichocarpa POPTR_0004s23460 N 0.729
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.728
27955.m000377 Ricinus communis 27955.m000377 N 0.726
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.726
29765.m000727 Ricinus communis 29765.m000727 N 0.721
PK23097.1 Cannabis sativa PK23097.1 N 0.720
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.720
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.720
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.718
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.716
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.716
mgf011994m Mimulus guttatus mgf011994m N 0.716
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.716
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.714
MDP0000665847 Malus x domestica MDP0000665847 N 0.711
MDP0000186494 Malus x domestica MDP0000186494 N 0.711
BGIOSIBCE004076 Oryza indica BGIOSIBCE004076 N 0.708
MDP0000119110 Malus x domestica MDP0000119110 N 0.707
MDP0000501473 Malus x domestica MDP0000501473 N 0.707
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.706
PK22673.1 Cannabis sativa PK22673.1 N 0.706
Glyma12g28690.1 Glycine max Glyma12g28690.1 N 0.706