CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
KHDRBS2
(
Anolis carolinensis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSACAG00000006691
T18408_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
KHDRBS2
M176_0.6
Homo sapiens
RAUAAAM
RNAcompete
Ray et al.(2013)
RNCMPT00185
1.000
KHDRBS3
M033_0.6
Homo sapiens
AUAAAV
RNAcompete
Ray et al.(2013)
RNCMPT00034
0.857
KHDRBS1
M160_0.6
Homo sapiens
AUAAAAV
RNAcompete
Ray et al.(2013)
RNCMPT00169
0.776
Khdrbs1
M060_0.6
Mus musculus
UAAAAVV
RNAcompete
Ray et al.(2013)
RNCMPT00062
0.776
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000006602
KH
35
115
SERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPP
Links
Other
KH
family RBPs
Other
Anolis carolinensis
RBPs
113 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Cucsa.116130
Cucumis sativus
Cucsa.116130
N
0.000
Glyma05g08160.1
Glycine max
Glyma05g08160.1
N
0.000
Glyma17g12730.1
Glycine max
Glyma17g12730.1
N
0.000
cassava24191.valid.m1
Manihot esculenta
cassava24191.valid.m1
N
0.000
29807.m000475
Ricinus communis
29807.m000475
N
0.000
GSVIVG00015463001
Vitis vinifera
GSVIVG00015463001
N
0.000