Medtr1g020830 (Medicago truncatula)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Medtr1g020830 T21410_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr1g020830.1 KH 113 178
Medtr1g020830.1 KH 205 271

Links

Other KH family RBPs
Other Medicago truncatula RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002880683.1 Arabidopsis lyrata fgenesh2_kg.4__512__AT2G25970.1 N 0.820
AT2G25970 Arabidopsis thaliana AT2G25970-TAIR-G N 0.820
BRADI3G08410 Brachypodium distachyon BRADI3G08410 N 0.774
PK01594.1 Cannabis sativa PK01594.1 N 0.857
PK09389.1 Cannabis sativa PK09389.1 N 0.722
Cucsa.395190 Cucumis sativus Cucsa.395190 N 0.887
Cucsa.220100 Cucumis sativus Cucsa.220100 N 0.722
Glyma17g34850.1 Glycine max Glyma17g34850.1 N 0.887
Glyma14g10670.1 Glycine max Glyma14g10670.1 N 0.887
Glyma06g05400.1 Glycine max Glyma06g05400.1 N 0.880
Glyma04g05330.1 Glycine max Glyma04g05330.1 N 0.827
LjSGA_026050.1 Lotus japonicus LjSGA_026050.1 N 0.880
MDP0000222202 Malus x domestica MDP0000222202 N 0.827
MDP0000142384 Malus x domestica MDP0000142384 N 0.707
MDP0000301141 Malus x domestica MDP0000301141 N 0.707
MDP0000302754 Malus x domestica MDP0000302754 N 0.812
MDP0000379391 Malus x domestica MDP0000379391 N 0.745
cassava29872.valid.m1 Manihot esculenta cassava29872.valid.m1 N 0.707
cassava30219.valid.m1 Manihot esculenta cassava30219.valid.m1 N 0.842
cassava30216.valid.m1 Manihot esculenta cassava30216.valid.m1 N 0.842
cassava30217.valid.m1 Manihot esculenta cassava30217.valid.m1 N 0.842
Medtr3g140110 Medicago truncatula Medtr3g140110 N 0.872
Medtr3g140090 Medicago truncatula Medtr3g140090 N 0.865
mgf005239m Mimulus guttatus mgf005239m N 0.820
mgf008502m Mimulus guttatus mgf008502m N 0.835
BGIOSIBCE006191 Oryza indica BGIOSIBCE006191 N 0.782
LOC_Os02g13130 Oryza sativa LOC_Os02g13130 N 0.782
PDK_20s1621601g001 Phoenix dactylifera PDK_20s1621601g001 N 0.782
B9INI7_POPTR Populus trichocarpa POPTR_0018s05020 N 0.835
ppa002323m Prunus persica ppa002323m N 0.812
ppa002757m Prunus persica ppa002757m N 0.714
29794.m003342 Ricinus communis 29794.m003342 N 0.842
SB04G007950 Sorghum bicolor Sb04g007950 N 0.782
GSVIVG00035354001 Vitis vinifera GSVIVG00035354001 N 0.880
GRMZM2G177781 Zea mays GRMZM2G177781 N 0.774
GRMZM2G162992 Zea mays GRMZM2G162992 N 0.767