CIMG_09023 (Coccidioides immitis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CIMG_09023 T28692_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CIMG_09023T0 RRM 94 165
CIMG_09023T0 RRM 186 256
CIMG_09023T0 RRM 312 376

Links

Other RRM family RBPs
Other Coccidioides immitis RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB00309.1 Alternaria brassicicola AB00309.1 N 0.887
fgenesh1_pm.00083_#_553 Aspergillus carbonarius fgenesh1_pm.00083_#_553 N 0.933
ACLA_023580 Aspergillus clavatus CADACLAG00002187 N 0.919
AFLA_067600 Aspergillus flavus CADAFLAG00008184 N 0.919
AFUA_1G12000 Aspergillus fumigatus CADAFUAG00007354 N 0.784
ANIA_10164 Aspergillus nidulans CADANIAG00001543 N 0.942
An08g04280 Aspergillus niger CADANGAG00006749 N 0.938
AO090001000353 Aspergillus oryzae CADAORAG00000317 N 0.919
ATEG_00398 Aspergillus terreus CADATEAG00007828 N 0.928
CHGG_05573 Chaetomium globosum CHGG_05573 N 0.784
CPSG_01385 Coccidioides posadasii CPSG_01385 N 0.990
estExt_Genewise1.C_11570 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11570 N 0.887
GLRG_08449 Colletotrichum graminicola GLRG_08449 N 0.909
estExt_Genewise1Plus.C_11264 Cryphonectria parasitica estExt_Genewise1Plus.C_11264 N 0.933
FGSG_05417 Fusarium graminearum FGSG_05417 N 0.875
FOXG_09482 Fusarium oxysporum FOXG_09482 N 0.899
FVEG_07111 Fusarium verticillioides FVEG_07111 N 0.899
HCAG_09244 Histoplasma capsulatum HCAG_09244 N 0.861
MCYG_03737 Microsporum canis MCYG_03737 N 0.976
MGYG_03339 Microsporum gypseum MGYG_03339 N 0.962
estExt_fgenesh1_kg.C_40363 Myceliophthora thermophila estExt_fgenesh1_kg.C_40363 N 0.942
estExt_Genewise1.C_140496 Mycosphaerella fijiensis estExt_Genewise1.C_140496 N 0.905
e_gw1.2.1591.1 Mycosphaerella graminicola e_gw1.2.1591.1 N 0.919
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 Nectria haematococca estExt_Genewise1Plus.C_sca_10_chr8_2_00705 N 0.918
NFIA_013530 Neosartorya fischeri CADNFIAG00000800 N 0.942
NCU07874 Neurospora crassa NCU07874 N 0.947
estExt_fgenesh3_kg.C_200038 Neurospora discreta estExt_fgenesh3_kg.C_200038 N 0.900
PABG_03400 Paracoccidioides brasiliensis PABG_03400 N 0.976
Pc12g15120 Penicillium chrysogenum Pc12g15120 N 0.923
PMAA_098010 Penicillium marneffei PMAA_098010 N 0.942
EAT81850.2 Phaeosphaeria nodorum EAT81850.2 N 0.887
Pa_7_10990 Podospora anserina Pa_7_10990 N 0.933
PGTG_08590 Puccinia graminis PGTG_08590 N 0.702
PTRG_10065 Pyrenophora tritici repentis PTRG_10065 N 0.878
SS1G_03339 Sclerotinia sclerotiorum SS1G_03339 N 0.938
SNOG_10456 Stagonospora nodorum SNOG_10456 N 0.887
estExt_Genewise1Plus.C_32201 Thielavia terrestris estExt_Genewise1Plus.C_32201 N 0.957
estExt_fgenesh1_pg.C_90049 Trichoderma atroviride estExt_fgenesh1_pg.C_90049 N 0.894
estExt_GeneWisePlus.C_11433 Trichoderma reesei estExt_GeneWisePlus.C_11433 N 0.899
e_gw1.32.97.1 Trichoderma virens e_gw1.32.97.1 N 0.913
TEQG_03955 Trichophyton equinum TEQG_03955 N 0.981
TERG_05178 Trichophyton rubrum TERG_05178 N 0.981
TESG_05056 Trichophyton tonsurans TESG_05056 N 0.800
GSTUMT00010135001 Tuber melanosporum GSTUMT00010135001 N 0.938
VDBG_07004 Verticillium albo atrum VDBG_07004 N 0.856
VDAG_06648 Verticillium dahliae VDAG_06648 N 0.706