ENSBTAG00000012502 (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000012502 T34848_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.754
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.754
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.754
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000016590 RRM 14 67
ENSBTAP00000016590 RRM 100 168
ENSBTAP00000052239 RRM 14 67
ENSBTAP00000052239 RRM 100 168

Links

Other RRM family RBPs
Other Bos taurus RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.000
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.000
EDI_338210 Entamoeba dispar EDI_338210 N 0.000
EIN_288540 Entamoeba invadens EIN_288540 N 0.000
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.000
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.000
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.000