ENSBTAG00000012502 (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000012502 T34848_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.754
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.754
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.754
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000016590 RRM 14 67
ENSBTAP00000016590 RRM 100 168
ENSBTAP00000052239 RRM 14 67
ENSBTAP00000052239 RRM 100 168

Links

Other RRM family RBPs
Other Bos taurus RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.748
ENSCAFG00000000389 Canis familiaris ENSCAFG00000000389 N 0.736
ENSCAFG00000017467 Canis familiaris ENSCAFG00000017467 I 0.734
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.724
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.724
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.723
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.721
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.716
ENSCAFG00000017240 Canis familiaris ENSCAFG00000017240 N 0.706
ENSCAFG00000006386 Canis familiaris ENSCAFG00000006386 I 0.705
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.704
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.702
ENSCPOG00000020972 Cavia porcellus ENSCPOG00000020972 N 0.702
ENSCAFG00000010467 Canis familiaris ENSCAFG00000010467 I 0.701
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.701
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.701
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.701
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.701
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.701
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.701
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.701
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.701
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.701
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.701
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.701
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.701
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.701
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.701
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.701
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.701
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.701
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.701
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.701
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.701
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.701
HNRNPA1 Homo sapiens ENSG00000135486 D 0.701
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.701
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.701
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.701
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.701
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.701
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.701