CNOT4 (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000009161 T41936_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CNOT4
M147_0.6 		Homo sapiens GACAGA RNAcompete
Ray et al.(2013)
RNCMPT00156 		1.000
e_gw.71.47.1
M233_0.6 		Nematostella vectensis AGAYASA RNAcompete
Ray et al.(2013)
RNCMPT00278 		0.766
Cnot4
M008_0.6 		Drosophila melanogaster ASACAHW RNAcompete
Ray et al.(2013)
RNCMPT00008 		0.727
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000009445 RRM 111 187

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

68 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
rbm4.3 Danio rerio ENSDARG00000022129 D 0.000
ENSGACG00000019980 Gasterosteus aculeatus ENSGACG00000019980 I 0.000
ENSORLG00000011589 Oryzias latipes ENSORLG00000011589 I 0.000
ENSTRUG00000010623 Takifugu rubripes ENSTRUG00000010623 I 0.000
ENSTNIG00000005668 Tetraodon nigroviridis ENSTNIG00000005668 I 0.000