GD21374 (Drosophila simulans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0192810 T43989_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Hrb98DE
M093_0.6 		Drosophila melanogaster RGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00096 		0.993
Hrb98DE
M092_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00095 		0.993
Hrb98DE
M091_0.6 		Drosophila melanogaster GKUAGGK RNAcompete
Ray et al.(2013)
RNCMPT00094 		0.993
Hrb87F
M029_0.6 		Drosophila melanogaster GGUAGGG RNAcompete
Ray et al.(2013)
RNCMPT00029 		0.771
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0219776 RRM 2619 2688
FBpp0219776 RRM 2710 2779

Links

Other RRM family RBPs
Other Drosophila simulans RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BDBG_07521 Blastomyces dermatitidis BDBG_07521 N 0.000
estExt_Genewise1Plus.C_320091 Mycosphaerella fijiensis estExt_Genewise1Plus.C_320091 N 0.000
PABG_06048 Paracoccidioides brasiliensis PABG_06048 N 0.000
TERG_08096 Trichophyton rubrum TERG_08096 N 0.000
GSTUMT00004251001 Tuber melanosporum GSTUMT00004251001 N 0.000