mgf012875m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf012875m T53717_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf012875m RRM 43 113

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002864670.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002097 N 0.817
XM_002887486.1 Arabidopsis lyrata fgenesh2_kg.2__1690__AT1G74230.1 N 0.761
GR-RBP5 Arabidopsis thaliana AT1G74230-TAIR-G N 0.761
GR-RBP3 Arabidopsis thaliana AT5G61030-TAIR-G N 0.803
PK15111.1 Cannabis sativa PK15111.1 N 0.789
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.803
Cucsa.113230 Cucumis sativus Cucsa.113230 N 0.746
Glyma17g08630.1 Glycine max Glyma17g08630.1 N 0.803
Glyma08g26900.1 Glycine max Glyma08g26900.1 N 0.732
Glyma05g00400.1 Glycine max Glyma05g00400.1 N 0.803
Glyma18g50150.1 Glycine max Glyma18g50150.1 N 0.746
chr1.CM0410.300.nd Lotus japonicus chr1.CM0410.300.nd N 0.704
LjT12A09.50.nd Lotus japonicus LjT12A09.50.nd N 0.704
MDP0000255642 Malus x domestica MDP0000255642 N 0.732
MDP0000635271 Malus x domestica MDP0000635271 N 0.775
MDP0000302917 Malus x domestica MDP0000302917 N 0.732
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.817
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.845
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.817
Medtr3g105170 Medicago truncatula Medtr3g105170 N 0.704
mgf016144m Mimulus guttatus mgf016144m N 1.000
mgf014059m Mimulus guttatus mgf014059m N 1.000
mgf007732m Mimulus guttatus mgf007732m N 0.817
PDK_20s1742611g001 Phoenix dactylifera PDK_20s1742611g001 N 0.718
PDK_20s1615461g006 Phoenix dactylifera PDK_20s1615461g006 N 0.704
PDK_20s1328241g004 Phoenix dactylifera PDK_20s1328241g004 N 0.775
A9PGV5_POPTR Populus trichocarpa POPTR_0001s32720 N 0.704
B9I2R7_POPTR Populus trichocarpa POPTR_0012s05870 N 0.775
A9PIG6_POPTR Populus trichocarpa POPTR_0015s06810 N 0.718
ppa010113m Prunus persica ppa010113m N 0.775
30138.m003973 Ricinus communis 30138.m003973 N 0.789
SB08G015580 Sorghum bicolor Sb08g015580 N 0.704
GSVIVG00007865001 Vitis vinifera GSVIVG00007865001 N 0.845