fgenesh1_pm.00083_#_553 (Aspergillus carbonarius)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.00083_#_553 T56569_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.00083_#_553 RRM 92 164
fgenesh1_pm.00083_#_553 RRM 185 255
fgenesh1_pm.00083_#_553 RRM 311 375

Links

Other RRM family RBPs
Other Aspergillus carbonarius RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB00309.1 Alternaria brassicicola AB00309.1 N 0.878
ACLA_023580 Aspergillus clavatus CADACLAG00002187 N 0.952
AFLA_067600 Aspergillus flavus CADAFLAG00008184 N 0.957
AFUA_1G12000 Aspergillus fumigatus CADAFUAG00007354 N 0.775
ANIA_10164 Aspergillus nidulans CADANIAG00001543 N 0.943
An08g04280 Aspergillus niger CADANGAG00006749 N 0.986
AO090001000353 Aspergillus oryzae CADAORAG00000317 N 0.957
ATEG_00398 Aspergillus terreus CADATEAG00007828 N 0.967
CHGG_05573 Chaetomium globosum CHGG_05573 N 0.751
CIMG_09023 Coccidioides immitis CIMG_09023 N 0.933
CPSG_01385 Coccidioides posadasii CPSG_01385 N 0.928
estExt_Genewise1.C_11570 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11570 N 0.869
GLRG_08449 Colletotrichum graminicola GLRG_08449 N 0.876
estExt_Genewise1Plus.C_11264 Cryphonectria parasitica estExt_Genewise1Plus.C_11264 N 0.890
FGSG_05417 Fusarium graminearum FGSG_05417 N 0.842
FOXG_09482 Fusarium oxysporum FOXG_09482 N 0.866
FVEG_07111 Fusarium verticillioides FVEG_07111 N 0.866
HCAG_09244 Histoplasma capsulatum HCAG_09244 N 0.809
MCYG_03737 Microsporum canis MCYG_03737 N 0.919
MGYG_03339 Microsporum gypseum MGYG_03339 N 0.910
estExt_fgenesh1_kg.C_40363 Myceliophthora thermophila estExt_fgenesh1_kg.C_40363 N 0.904
estExt_Genewise1.C_140496 Mycosphaerella fijiensis estExt_Genewise1.C_140496 N 0.895
e_gw1.2.1591.1 Mycosphaerella graminicola e_gw1.2.1591.1 N 0.900
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 Nectria haematococca estExt_Genewise1Plus.C_sca_10_chr8_2_00705 N 0.885
NFIA_013530 Neosartorya fischeri CADNFIAG00000800 N 0.952
NCU07874 Neurospora crassa NCU07874 N 0.909
estExt_fgenesh3_kg.C_200038 Neurospora discreta estExt_fgenesh3_kg.C_200038 N 0.864
PABG_03400 Paracoccidioides brasiliensis PABG_03400 N 0.933
Pc12g15120 Penicillium chrysogenum Pc12g15120 N 0.933
PMAA_098010 Penicillium marneffei PMAA_098010 N 0.919
EAT81850.2 Phaeosphaeria nodorum EAT81850.2 N 0.869
Pa_7_10990 Podospora anserina Pa_7_10990 N 0.895
PTRG_10065 Pyrenophora tritici repentis PTRG_10065 N 0.869
SS1G_03339 Sclerotinia sclerotiorum SS1G_03339 N 0.900
SNOG_10456 Stagonospora nodorum SNOG_10456 N 0.869
estExt_Genewise1Plus.C_32201 Thielavia terrestris estExt_Genewise1Plus.C_32201 N 0.904
estExt_fgenesh1_pg.C_90049 Trichoderma atroviride estExt_fgenesh1_pg.C_90049 N 0.866
estExt_GeneWisePlus.C_11433 Trichoderma reesei estExt_GeneWisePlus.C_11433 N 0.871
e_gw1.32.97.1 Trichoderma virens e_gw1.32.97.1 N 0.880
TEQG_03955 Trichophyton equinum TEQG_03955 N 0.923
TERG_05178 Trichophyton rubrum TERG_05178 N 0.923
TESG_05056 Trichophyton tonsurans TESG_05056 N 0.767
GSTUMT00010135001 Tuber melanosporum GSTUMT00010135001 N 0.914
VDBG_07004 Verticillium albo atrum VDBG_07004 N 0.823