CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
fgenesh1_pm.00083_#_553
(
Aspergillus carbonarius
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
fgenesh1_pm.00083_#_553
T56569_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.00083_#_553
RRM
92
164
LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIR
fgenesh1_pm.00083_#_553
RRM
185
255
IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIR
fgenesh1_pm.00083_#_553
RRM
311
375
CYVGNLTPYTTQGDLVPLFQNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLSGYNVNGRPLK
Links
Other
RRM
family RBPs
Other
Aspergillus carbonarius
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LbrM33_V2.1360
Leishmania braziliensis
LbrM33_V2.1360
N
0.000
LinJ33_V3.1210
Leishmania infantum
LinJ33_V3.1210
N
0.000
LmjF33.1150
Leishmania major
LmjF33.1150
N
0.000