CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GSTUMT00010135001
(
Tuber melanosporum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
GSTUMT00010135001
T56960_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSTUMT00010135001
RRM
88
157
LYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSKGYNYGFIEYDDPGAAERAMQTLNGRRIHQAEIR
GSTUMT00010135001
RRM
178
248
IFVGDLSNEVNDEVLMQAFSTFGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIR
GSTUMT00010135001
RRM
304
368
CYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLK
Links
Other
RRM
family RBPs
Other
Tuber melanosporum
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Bm1_19485
Brugia malayi
Bm1_19485
N
0.000