MDP0000142206 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000142206 T57343_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000142206 RRM 152 199
MDP0000142206 RRM 223 294
MDP0000142206 RRM 343 407

Links

Other RRM family RBPs
Other Malus x domestica RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002894151.1 Arabidopsis lyrata fgenesh2_kg.1__4049__AT1G49600.1 I 0.700
ATRBP47A Arabidopsis thaliana AT1G49600-TAIR-G I 0.700
ATRBP47B Arabidopsis thaliana AT3G19130-TAIR-G I 0.700
PK15272.1 Cannabis sativa PK15272.1 I 0.744
Glyma07g33300.1 Glycine max Glyma07g33300.1 I 0.729
Glyma02g15190.1 Glycine max Glyma02g15190.1 I 0.729
chr4.CM0079.170.nc Lotus japonicus chr4.CM0079.170.nc I 0.715
MDP0000262005 Malus x domestica MDP0000262005 N 0.941
cassava1152.valid.m1 Manihot esculenta cassava1152.valid.m1 I 0.715
Medtr4g129250 Medicago truncatula Medtr4g129250 I 0.700
PDK_20s1512141g001 Phoenix dactylifera PDK_20s1512141g001 N 0.707
B9HRX8_POPTR Populus trichocarpa POPTR_0009s10820 I 0.705
B9N4W3_POPTR Populus trichocarpa POPTR_0004s15080 I 0.715
ppa005661m Prunus persica ppa005661m I 0.821
29801.m003218 Ricinus communis 29801.m003218 I 0.710
GSVIVG00031780001 Vitis vinifera GSVIVG00031780001 I 0.725
GSVIVG00009558001 Vitis vinifera GSVIVG00009558001 I 0.702