Minc01924 (Meloidogyne incognita)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Minc01924 T57763_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MSI1
M167_0.6 		Homo sapiens UAGKWRG RNAcompete
Ray et al.(2013)
RNCMPT00176 		0.707
MSI1
M040_0.6 		Homo sapiens UAGUWRG RNAcompete
Ray et al.(2013)
RNCMPT00041 		0.707
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Minc01924 RRM 91 160
Minc01924 RRM 180 249

Links

Other RRM family RBPs
Other Meloidogyne incognita RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MSI1 Anolis carolinensis ENSACAG00000002762 I 0.714
CBN10423 Caenorhabditis brenneri CBN10423 I 0.821
CBG03639 Caenorhabditis briggsae CBG03639 I 0.814
msi-1 Caenorhabditis elegans R10E9.1 I 0.829
MSI1 Callithrix jacchus ENSCJAG00000008578 I 0.707
MSI2 Canis familiaris ENSCAFG00000017418 I 0.700
estExt_Genewise1Plus.C_620039 Capitella teleta estExt_Genewise1Plus.C_620039 I 0.729
MSI1 Cavia porcellus ENSCPOG00000012361 I 0.707
msi2b Danio rerio ENSDARG00000032614 I 0.721
msi2a Danio rerio ENSDARG00000033901 I 0.721
gw1.72.166.1 Daphnia pulex gw1.72.166.1 I 0.707
MSI1 Gasterosteus aculeatus ENSGACG00000012679 I 0.736
MSI2 Gorilla gorilla ENSGGOG00000013182 I 0.721
MSI2 Homo sapiens ENSG00000153944 I 0.721
MSI1 Homo sapiens ENSG00000135097 D 0.707
MSI2 Microcebus murinus ENSMICG00000013598 I 0.721
Msi1 Mus musculus ENSMUSG00000054256 I 0.700
Msi2 Mus musculus ENSMUSG00000069769 I 0.721
MSI2 Oryctolagus cuniculus ENSOCUG00000010440 I 0.721
MSI2 Pan troglodytes ENSPTRG00000009437 I 0.721
MSI1 Taeniopygia guttata ENSTGUG00000009534 I 0.707
MSI1 Takifugu rubripes ENSTRUG00000015636 I 0.729
MSI1 Takifugu rubripes ENSTRUG00000016249 I 0.736
MSI1 Tetraodon nigroviridis ENSTNIG00000011469 I 0.736
MSI1 Tursiops truncatus ENSTTRG00000005663 I 0.700
AAA50004 Xenopus laevis AAA50004 I 0.736
AAI69841 Xenopus laevis AAI69841 I 0.736