MSI2 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000153944 T37289_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MSI1
M167_0.6 		Homo sapiens UAGKWRG RNAcompete
Ray et al.(2013)
RNCMPT00176 		0.843
MSI1
M040_0.6 		Homo sapiens UAGUWRG RNAcompete
Ray et al.(2013)
RNCMPT00041 		0.843
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000284073 RRM 23 92
ENSP00000284073 RRM 112 181
ENSP00000313616 RRM 19 88
ENSP00000313616 RRM 108 177
ENSP00000392607 RRM 51 120
ENSP00000414671 RRM 1 70
ENSP00000414671 RRM 90 159

Links

Other RRM family RBPs
Other Homo sapiens RBPs

85 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MSI2 Anolis carolinensis ENSACAG00000005452 N 1.000
Msi2 Mus musculus ENSMUSG00000069769 I 1.000
MSI2 Pan troglodytes ENSPTRG00000009437 I 1.000
MSI2 Tursiops truncatus ENSTTRG00000002189 N 1.000
LOC100390978 Callithrix jacchus ENSCJAG00000013998 I 1.000
MSI2 Oryctolagus cuniculus ENSOCUG00000010440 I 1.000
ENSDORG00000005394 Dipodomys ordii ENSDORG00000005394 N 1.000
MSI2 Microcebus murinus ENSMICG00000013598 I 1.000
MSI2 Gorilla gorilla ENSGGOG00000013182 I 1.000
msi2b Danio rerio ENSDARG00000032614 I 0.986
ENSPPYG00000008244 Pongo pygmaeus ENSPPYG00000008244 N 0.986
AAI69841 Xenopus laevis AAI69841 I 0.971
MSI2 Ochotona princeps ENSOPRG00000000872 N 0.971
AAA50004 Xenopus laevis AAA50004 I 0.971
MSI2 Canis familiaris ENSCAFG00000017418 I 0.957
msi2a Danio rerio ENSDARG00000033901 I 0.950
MSI1 Procavia capensis ENSPCAG00000002300 N 0.929
A2PYH9_BOVIN Bos taurus ENSBTAG00000009800 N 0.929
MSI1 Spermophilus tridecemlineatus ENSSTOG00000009799 N 0.929
MSI1 Tupaia belangeri ENSTBEG00000007182 N 0.914
MSI2 Pteropus vampyrus ENSPVAG00000017053 I 0.907
MSI1 Microcebus murinus ENSMICG00000000708 N 0.900
MSI2 Echinops telfairi ENSETEG00000012450 N 0.861
Rbp6 Drosophila melanogaster FBgn0260943 I 0.857
MSI1 Taeniopygia guttata ENSTGUG00000009534 I 0.850
estExt_Genewise1Plus.C_620039 Capitella teleta estExt_Genewise1Plus.C_620039 I 0.843
MSI1 Callithrix jacchus ENSCJAG00000008578 I 0.843
MSI1 Anolis carolinensis ENSACAG00000002762 I 0.843
MSI1 Gasterosteus aculeatus ENSGACG00000012679 I 0.843
MSI1 Cavia porcellus ENSCPOG00000012361 I 0.843
MSI1 Takifugu rubripes ENSTRUG00000016249 I 0.843
MSI1 Tetraodon nigroviridis ENSTNIG00000011469 I 0.843
MSI1 Homo sapiens ENSG00000135097 D 0.843
AAA49920 Xenopus laevis AAA49920 I 0.836
AAH82667 Xenopus laevis AAH82667 I 0.836
CBU92439 Xenopus laevis CBU92439 I 0.836
Msi1 Mus musculus ENSMUSG00000054256 I 0.836
CBF67566 Xenopus laevis CBF67566 I 0.836
msi1 Xenopus tropicalis ENSXETG00000012216 I 0.836
MSI1 Tursiops truncatus ENSTTRG00000005663 I 0.836
MSI1 Oryzias latipes ENSORLG00000008982 N 0.833
MSI2 Macaca mulatta ENSMMUG00000002069 I 0.832
AAH84959 Xenopus laevis AAH84959 I 0.829
AAA49919 Xenopus laevis AAA49919 I 0.829
MSI2 Bos taurus ENSBTAG00000004406 N 0.829
MSI1 Takifugu rubripes ENSTRUG00000015636 I 0.829
MSI1 Canis familiaris ENSCAFG00000010283 I 0.824
MSI1 Dasypus novemcinctus ENSDNOG00000005713 I 0.821
ENSPPYG00000005027 Pongo pygmaeus ENSPPYG00000005027 I 0.821
GE22169 Drosophila yakuba FBgn0239397 I 0.807
GI12835 Drosophila mojavensis FBgn0135592 I 0.807
GD12423 Drosophila simulans FBgn0184155 I 0.807
GF24401 Drosophila ananassae FBgn0101395 I 0.807
GG15829 Drosophila erecta FBgn0108068 I 0.807
GM24349 Drosophila sechellia FBgn0179213 I 0.807
gw1.72.166.1 Daphnia pulex gw1.72.166.1 I 0.807
GK18043 Drosophila willistoni FBgn0220042 I 0.807
GH15068 Drosophila grimshawi FBgn0122543 I 0.807
LOC100070744 Equus caballus ENSECAG00000011435 I 0.800
msi1 Danio rerio ENSDARG00000010710 I 0.793
MSI1 Oryctolagus cuniculus ENSOCUG00000027716 I 0.779
MSI1 Felis catus ENSFCAG00000011007 I 0.771
Ame_R019333 Ailuropoda melanoleuca Ame_R019333 I 0.771
MSI1 Macaca mulatta ENSMMUG00000031527 I 0.771
Msi1 Rattus norvegicus ENSRNOG00000001156 I 0.764
MSI1 Echinops telfairi ENSETEG00000004756 I 0.764
MSI1 Pteropus vampyrus ENSPVAG00000002225 I 0.757
AGAP006656 Anopheles gambiae AGAP006656 N 0.750
nasonia_NCBI_hmm598804 Nasonia vitripennis nasonia_NCBI_hmm598804 N 0.743
LOC100053469 Equus caballus ENSECAG00000017526 I 0.743
MSI1 Pan troglodytes ENSPTRG00000005531 I 0.743
MSI1 Sus scrofa ENSSSCG00000017619 N 0.736
msi-1 Caenorhabditis elegans R10E9.1 I 0.736
LOAG_14850 Loa loa LOAG_14850 N 0.732
WUBG_09077 Wuchereria bancrofti WUBG_09077 N 0.732
CBN10423 Caenorhabditis brenneri CBN10423 I 0.729
MSI2 Cavia porcellus ENSCPOG00000008752 N 0.729
CJA15670 Caenorhabditis japonica CJA15670 N 0.729
MSI1 Gallus gallus ENSGALG00000007227 N 0.722
CBG03639 Caenorhabditis briggsae CBG03639 I 0.721
Minc01924 Meloidogyne incognita Minc01924 I 0.721
Bm1_16000 Brugia malayi Bm1_16000 N 0.718
MSI2 Tarsius syrichta ENSTSYG00000011839 N 0.714
MSI1 Gorilla gorilla ENSGGOG00000010328 I 0.714