MSI2 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000017418 T35156_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MSI1
M167_0.6 		Homo sapiens UAGKWRG RNAcompete
Ray et al.(2013)
RNCMPT00176 		0.836
MSI1
M040_0.6 		Homo sapiens UAGUWRG RNAcompete
Ray et al.(2013)
RNCMPT00041 		0.836
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000025669 RRM 3 72
ENSCAFP00000025669 RRM 92 161
ENSCAFP00000025672 RRM 1 70

Links

Other RRM family RBPs
Other Canis familiaris RBPs

74 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MSI2 Microcebus murinus ENSMICG00000013598 I 0.957
MSI2 Homo sapiens ENSG00000153944 I 0.957
MSI2 Pan troglodytes ENSPTRG00000009437 I 0.957
MSI2 Gorilla gorilla ENSGGOG00000013182 I 0.957
MSI2 Oryctolagus cuniculus ENSOCUG00000010440 I 0.957
Msi2 Mus musculus ENSMUSG00000069769 I 0.957
msi2b Danio rerio ENSDARG00000032614 I 0.943
AAI69841 Xenopus laevis AAI69841 I 0.929
AAA50004 Xenopus laevis AAA50004 I 0.929
MSI2 Bos taurus ENSBTAG00000004406 N 0.914
msi2a Danio rerio ENSDARG00000033901 I 0.907
LOC100390978 Callithrix jacchus ENSCJAG00000013998 I 0.886
ENSXETG00000021349 Xenopus tropicalis ENSXETG00000021349 N 0.886
MSI2 Pteropus vampyrus ENSPVAG00000017053 I 0.871
MSI1 Taeniopygia guttata ENSTGUG00000009534 I 0.843
MSI1 Tetraodon nigroviridis ENSTNIG00000011469 I 0.836
MSI1 Callithrix jacchus ENSCJAG00000008578 I 0.836
MSI1 Homo sapiens ENSG00000135097 D 0.836
MSI1 Cavia porcellus ENSCPOG00000012361 I 0.836
MSI1 Takifugu rubripes ENSTRUG00000016249 I 0.836
MSI1 Anolis carolinensis ENSACAG00000002762 I 0.836
MSI1 Gasterosteus aculeatus ENSGACG00000012679 I 0.836
MSI1 Tursiops truncatus ENSTTRG00000005663 I 0.829
CBU92439 Xenopus laevis CBU92439 I 0.829
CBF67566 Xenopus laevis CBF67566 I 0.829
AAH82667 Xenopus laevis AAH82667 I 0.829
AAA49920 Xenopus laevis AAA49920 I 0.829
estExt_Genewise1Plus.C_620039 Capitella teleta estExt_Genewise1Plus.C_620039 I 0.829
msi1 Xenopus tropicalis ENSXETG00000012216 I 0.829
Msi1 Mus musculus ENSMUSG00000054256 I 0.829
MSI1 Takifugu rubripes ENSTRUG00000015636 I 0.821
AAA49919 Xenopus laevis AAA49919 I 0.821
AAH84959 Xenopus laevis AAH84959 I 0.821
MSI1 Canis familiaris ENSCAFG00000010283 I 0.817
MSI1 Dasypus novemcinctus ENSDNOG00000005713 I 0.814
ENSPPYG00000005027 Pongo pygmaeus ENSPPYG00000005027 I 0.814
MSI2 Macaca mulatta ENSMMUG00000002069 I 0.790
GI12835 Drosophila mojavensis FBgn0135592 I 0.786
GM24349 Drosophila sechellia FBgn0179213 I 0.786
GE22169 Drosophila yakuba FBgn0239397 I 0.786
gw1.72.166.1 Daphnia pulex gw1.72.166.1 I 0.786
Rbp6 Drosophila melanogaster FBgn0260943 I 0.786
GK18043 Drosophila willistoni FBgn0220042 I 0.786
GD12423 Drosophila simulans FBgn0184155 I 0.786
GH15068 Drosophila grimshawi FBgn0122543 I 0.786
GG15829 Drosophila erecta FBgn0108068 I 0.786
GF24401 Drosophila ananassae FBgn0101395 I 0.786
LOC100070744 Equus caballus ENSECAG00000011435 I 0.779
msi1 Danio rerio ENSDARG00000010710 I 0.779
MSI1 Oryctolagus cuniculus ENSOCUG00000027716 I 0.771
MSI1 Macaca mulatta ENSMMUG00000031527 I 0.764
Ame_R019333 Ailuropoda melanoleuca Ame_R019333 I 0.764
Msi1 Rattus norvegicus ENSRNOG00000001156 I 0.757
MSI1 Felis catus ENSFCAG00000011007 I 0.757
MSI1 Echinops telfairi ENSETEG00000004756 I 0.750
Msi2 Rattus norvegicus ENSRNOG00000025338 N 0.743
MSI1 Pteropus vampyrus ENSPVAG00000002225 I 0.743
LOC100053469 Equus caballus ENSECAG00000017526 I 0.736
MSI2 Cavia porcellus ENSCPOG00000008752 N 0.729
MSI1 Pan troglodytes ENSPTRG00000005531 I 0.729
msi-1 Caenorhabditis elegans R10E9.1 I 0.721
AGAP006656 Anopheles gambiae AGAP006656 N 0.721
nasonia_NCBI_hmm598804 Nasonia vitripennis nasonia_NCBI_hmm598804 N 0.721
ENSTRUG00000011715 Takifugu rubripes ENSTRUG00000011715 N 0.720
ENSGACG00000020302 Gasterosteus aculeatus ENSGACG00000020302 N 0.720
CBN10423 Caenorhabditis brenneri CBN10423 I 0.714
MSI2 Tarsius syrichta ENSTSYG00000011839 N 0.714
ENSORLG00000014711 Oryzias latipes ENSORLG00000014711 N 0.714
WUBG_12076 Wuchereria bancrofti WUBG_12076 N 0.714
CBG03639 Caenorhabditis briggsae CBG03639 I 0.707
zgc:110796 Danio rerio ENSDARG00000041299 N 0.700
PPA25469 Pristionchus pacificus PPA25469 N 0.700
MSI1 Gorilla gorilla ENSGGOG00000010328 I 0.700
Minc01924 Meloidogyne incognita Minc01924 I 0.700