CAOG_00458 (Capsaspora owczarzaki)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		CAOG_00458 T00261_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CAOG_00458T0 CCCH ZF 14 39
CAOG_00458T0 RRM 83 142
CAOG_00458T0 CCCH ZF 150 176

Links

Other CCCH ZF,RRM family RBPs
Other Capsaspora owczarzaki RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
U2AF1 Loxodonta africana ENSLAFG00000011460 N 0.757
U2AF1 Microcebus murinus ENSMICG00000013835 N 0.757
Q98TR0_CHICK Gallus gallus ENSGALG00000016198 N 0.757
U2AF1 Homo sapiens ENSG00000160201 N 0.757
U2AF1 Echinops telfairi ENSETEG00000002200 N 0.757
U2AF1 Macaca mulatta ENSMMUG00000022769 N 0.757
U2AF1 Monodelphis domestica ENSMODG00000021029 N 0.757
U2AF1 Tetraodon nigroviridis ENSTNIG00000008311 N 0.757
U2AF1 Tarsius syrichta ENSTSYG00000006799 N 0.757
U2AF1 Taeniopygia guttata ENSTGUG00000005826 N 0.757
U2AF1 Pan troglodytes ENSPTRG00000013952 N 0.757
U2af1 Mus musculus ENSMUSG00000061613 N 0.757
U2AF1 Cavia porcellus ENSCPOG00000004893 N 0.757
U2AF1 Oryzias latipes ENSORLG00000006182 N 0.757
U2AF1_BOVIN Bos taurus ENSBTAG00000011645 N 0.757
U2AF1 Anolis carolinensis ENSACAG00000017836 N 0.757
U2AF1 Procavia capensis ENSPCAG00000013413 N 0.748
U2AF1 Gasterosteus aculeatus ENSGACG00000014605 N 0.748
u2af1 Danio rerio ENSDARG00000015325 N 0.748
AAI08559 Xenopus laevis AAI08559 N 0.748
ENSGACG00000003454 Gasterosteus aculeatus ENSGACG00000003454 N 0.748
U2AF1 Ornithorhynchus anatinus ENSOANG00000006463 N 0.746
U2AF1 Myotis lucifugus ENSMLUG00000014756 N 0.746
U2AF1 Pteropus vampyrus ENSPVAG00000016992 N 0.746
Ame_R019749 Ailuropoda melanoleuca Ame_R019749 N 0.746
U2AF1 Vicugna pacos ENSVPAG00000002856 N 0.746
U2AF1 Tupaia belangeri ENSTBEG00000000453 N 0.746
U2AF1 Spermophilus tridecemlineatus ENSSTOG00000012766 N 0.746
LOC100057570 Equus caballus ENSECAG00000015558 N 0.746
U2AF1 Meleagris gallopavo ENSMGAG00000014587 N 0.746
U2af1 Dipodomys ordii ENSDORG00000000211 N 0.746
ENSORLG00000008857 Oryzias latipes ENSORLG00000008857 N 0.739
LOC100415206 Callithrix jacchus ENSCJAG00000015843 N 0.739
AAEL006713 Aedes aegypti AAEL006713 N 0.739
U2AF1 Canis familiaris ENSCAFG00000010572 N 0.739
CpipJ_CPIJ003901 Culex pipiens CpipJ_CPIJ003901 N 0.739
CpipJ_CPIJ016711 Culex pipiens CpipJ_CPIJ016711 N 0.739
AGAP002956 Anopheles gambiae AGAP002956 N 0.739
CPIJ003901 Culex quinquefasciatus CPIJ003901 N 0.739
CPIJ016711 Culex quinquefasciatus CPIJ016711 N 0.739
amel4_ncbi_hmm38272 Apis mellifera amel4_ncbi_hmm38272 N 0.730
e_gw.8.588.1 Branchiostoma floridae e_gw.8.588.1 N 0.730
U2AF1 Takifugu rubripes ENSTRUG00000013815 N 0.730
e_gw.8.587.1 Branchiostoma floridae e_gw.8.587.1 N 0.730
PHUM349680 Pediculus humanus PHUM349680 N 0.722
e_gw1.30.183.1 Daphnia pulex e_gw1.30.183.1 N 0.722
BGIBMGA010333 Bombyx mori BGIBMGA010333 N 0.722
nasonia_NCBI_hmm622923 Nasonia vitripennis nasonia_NCBI_hmm622923 N 0.722
e_gw1.49.82.1 Lottia gigantea e_gw1.49.82.1 N 0.716
U2AF1L4 Loxodonta africana ENSLAFG00000012923 N 0.716
U2af1l4 Mus musculus ENSMUSG00000078765 N 0.716
U2AF4_BOVIN Bos taurus ENSBTAG00000023610 N 0.716
U2AF1L4 Oryctolagus cuniculus ENSOCUG00000013434 N 0.716
U2AF1L4 Equus caballus ENSECAG00000017941 N 0.716
U2af1l4 Rattus norvegicus ENSRNOG00000024497 N 0.716
U2AF1L4 Monodelphis domestica ENSMODG00000014003 N 0.716
U2AF1L4 Sus scrofa ENSSSCG00000002896 N 0.716
184981 Helobdella robusta 184981 N 0.713
Aqu1.219575 Amphimedon queenslandica Aqu1.219575 N 0.713
e_gw.121.26.1 Nematostella vectensis e_gw.121.26.1 N 0.713
GE16227 Drosophila yakuba FBgn0233767 N 0.704
U2af38 Drosophila melanogaster FBgn0017457 N 0.704
GG24659 Drosophila erecta FBgn0116791 N 0.704
GF24893 Drosophila ananassae FBgn0101885 N 0.704
GA17536-RA Drosophila pseudoobscura FBgn0077547 N 0.704
ENSCING00000004086 Ciona intestinalis ENSCING00000004086 N 0.704
GH10217 Drosophila grimshawi FBgn0117698 N 0.704
GI15018 Drosophila mojavensis FBgn0137768 N 0.704
GJ17240 Drosophila virilis FBgn0204416 N 0.704
GD22967 Drosophila simulans FBgn0194360 N 0.704
GM16679 Drosophila sechellia FBgn0171592 N 0.704
GL25824 Drosophila persimilis FBgn0163408 N 0.704
GK14823 Drosophila willistoni FBgn0216828 N 0.704