nasonia_NCBI_hmm622923 (Nasonia vitripennis)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		nasonia_NCBI_hmm622923 T00365_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm622923 CCCH ZF 13 39
nasonia_NCBI_hmm622923 RRM 85 143
nasonia_NCBI_hmm622923 CCCH ZF 151 177

Links

Other CCCH ZF,RRM family RBPs
Other Nasonia vitripennis RBPs

98 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PHUM349680 Pediculus humanus PHUM349680 N 1.000
BGIBMGA010333 Bombyx mori BGIBMGA010333 N 1.000
amel4_ncbi_hmm38272 Apis mellifera amel4_ncbi_hmm38272 N 0.991
CPIJ003901 Culex quinquefasciatus CPIJ003901 N 0.973
AGAP002956 Anopheles gambiae AGAP002956 N 0.973
AAEL006713 Aedes aegypti AAEL006713 N 0.973
e_gw1.30.183.1 Daphnia pulex e_gw1.30.183.1 N 0.973
CpipJ_CPIJ003901 Culex pipiens CpipJ_CPIJ003901 N 0.973
CpipJ_CPIJ016711 Culex pipiens CpipJ_CPIJ016711 N 0.973
CPIJ016711 Culex quinquefasciatus CPIJ016711 N 0.973
GH10217 Drosophila grimshawi FBgn0117698 N 0.965
GI15018 Drosophila mojavensis FBgn0137768 N 0.965
GG24659 Drosophila erecta FBgn0116791 N 0.965
GF24893 Drosophila ananassae FBgn0101885 N 0.965
GL25824 Drosophila persimilis FBgn0163408 N 0.965
GA17536-RA Drosophila pseudoobscura FBgn0077547 N 0.965
U2af38 Drosophila melanogaster FBgn0017457 N 0.965
GJ17240 Drosophila virilis FBgn0204416 N 0.965
GK14823 Drosophila willistoni FBgn0216828 N 0.965
GM16679 Drosophila sechellia FBgn0171592 N 0.965
GD22967 Drosophila simulans FBgn0194360 N 0.965
GE16227 Drosophila yakuba FBgn0233767 N 0.965
AAI08559 Xenopus laevis AAI08559 N 0.894
e_gw.121.26.1 Nematostella vectensis e_gw.121.26.1 N 0.894
U2AF1 Oryzias latipes ENSORLG00000006182 N 0.885
U2af1 Mus musculus ENSMUSG00000061613 N 0.885
U2AF1 Pan troglodytes ENSPTRG00000013952 N 0.885
U2AF1 Taeniopygia guttata ENSTGUG00000005826 N 0.885
U2AF1 Monodelphis domestica ENSMODG00000021029 N 0.885
U2AF1 Tarsius syrichta ENSTSYG00000006799 N 0.885
U2AF1 Tetraodon nigroviridis ENSTNIG00000008311 N 0.885
U2AF1 Microcebus murinus ENSMICG00000013835 N 0.885
U2AF1 Loxodonta africana ENSLAFG00000011460 N 0.885
U2AF1 Cavia porcellus ENSCPOG00000004893 N 0.885
U2AF1 Echinops telfairi ENSETEG00000002200 N 0.885
U2AF1 Homo sapiens ENSG00000160201 N 0.885
U2AF1 Macaca mulatta ENSMMUG00000022769 N 0.885
Q98TR0_CHICK Gallus gallus ENSGALG00000016198 N 0.885
U2AF1 Anolis carolinensis ENSACAG00000017836 N 0.885
U2AF1_BOVIN Bos taurus ENSBTAG00000011645 N 0.885
ENSCSAVG00000000329 Ciona savignyi ENSCSAVG00000000329 N 0.877
e_gw.8.587.1 Branchiostoma floridae e_gw.8.587.1 N 0.877
e_gw.8.588.1 Branchiostoma floridae e_gw.8.588.1 N 0.877
estExt_Genewise1.C_3650003 Capitella teleta estExt_Genewise1.C_3650003 N 0.877
ENSCING00000004086 Ciona intestinalis ENSCING00000004086 N 0.877
u2af1 Danio rerio ENSDARG00000015325 N 0.876
U2AF1 Gasterosteus aculeatus ENSGACG00000014605 N 0.876
ENSGACG00000003454 Gasterosteus aculeatus ENSGACG00000003454 N 0.876
e_gw1.49.82.1 Lottia gigantea e_gw1.49.82.1 N 0.871
U2AF1 Takifugu rubripes ENSTRUG00000013815 N 0.867
U2AF1 Procavia capensis ENSPCAG00000013413 N 0.867
LOC100415206 Callithrix jacchus ENSCJAG00000015843 N 0.867
LOC100057570 Equus caballus ENSECAG00000015558 N 0.858
Ame_R019749 Ailuropoda melanoleuca Ame_R019749 N 0.858
U2AF1 Canis familiaris ENSCAFG00000010572 N 0.858
U2af1 Dipodomys ordii ENSDORG00000000211 N 0.858
U2AF1 Spermophilus tridecemlineatus ENSSTOG00000012766 N 0.858
U2AF1 Pteropus vampyrus ENSPVAG00000016992 N 0.858
U2AF1 Ornithorhynchus anatinus ENSOANG00000006463 N 0.858
U2AF1 Myotis lucifugus ENSMLUG00000014756 N 0.858
U2AF1 Tupaia belangeri ENSTBEG00000000453 N 0.858
U2AF1 Meleagris gallopavo ENSMGAG00000014587 N 0.858
U2AF1 Vicugna pacos ENSVPAG00000002856 N 0.858
Smp_093100 Schistosoma mansoni Smp_093100 N 0.851
Aqu1.219575 Amphimedon queenslandica Aqu1.219575 N 0.851
DGIL_AUG5s4512g5t1 Acyrtosiphon pisum DGIL_AUG5s4512g5t1 N 0.847
U2AF1L4 Sus scrofa ENSSSCG00000002896 N 0.842
U2af1l4 Rattus norvegicus ENSRNOG00000024497 N 0.842
U2AF1L4 Equus caballus ENSECAG00000017941 N 0.842
U2AF4_BOVIN Bos taurus ENSBTAG00000023610 N 0.842
U2AF1L4 Oryctolagus cuniculus ENSOCUG00000013434 N 0.842
U2AF1L4 Loxodonta africana ENSLAFG00000012923 N 0.842
U2AF1L4 Monodelphis domestica ENSMODG00000014003 N 0.842
U2af1l4 Mus musculus ENSMUSG00000078765 N 0.842
ENSORLG00000008857 Oryzias latipes ENSORLG00000008857 N 0.841
XP_002156010.1 Hydra magnipapillata XP_002156010.1 N 0.832
184981 Helobdella robusta 184981 N 0.825
U2AF1L4 Gorilla gorilla ENSGGOG00000016828 N 0.825
e_gw1.35.104.1 Trichoplax adhaerens e_gw1.35.104.1 N 0.822
XP_001191705.1 Strongylocentrotus purpuratus XP_001191705.1 N 0.821
U2AF1L4 Homo sapiens ENSG00000161265 N 0.816
Sjc_0045900 Schistosoma japonicum Sjc_0045900 N 0.810
PTSG_08923 Salpingoeca rosetta PTSG_08923 N 0.805
ISCW019664 Ixodes scapularis ISCW019664 N 0.802
ENSGGOG00000025487 Gorilla gorilla ENSGGOG00000025487 N 0.796
U2AF1L4 Pan troglodytes ENSPTRG00000010860 N 0.782
XP_002167624.1 Hydra magnipapillata XP_002167624.1 N 0.779
SPPG_02695 Spizellomyces punctatus SPPG_02695 N 0.765
Q9YHU4_FUGRU Takifugu rubripes ENSTRUG00000010538 N 0.742
ENSTNIG00000013914 Tetraodon nigroviridis ENSTNIG00000013914 N 0.742
estExt_Genewise1Plus.C_31771 Mucor circinelloides estExt_Genewise1Plus.C_31771 N 0.723
CAOG_00458 Capsaspora owczarzaki CAOG_00458 N 0.722
ENSGGOG00000000469 Gorilla gorilla ENSGGOG00000000469 N 0.719
Aqu1.226671 Amphimedon queenslandica Aqu1.226671 N 0.714
RO3G_03843 Rhizopus oryzae RO3G_03843 N 0.714
Bm1_55710 Brugia malayi Bm1_55710 N 0.707
WUBG_02195 Wuchereria bancrofti WUBG_02195 N 0.707
LOAG_00486 Loa loa LOAG_00486 N 0.707