PTTG_07763 (Puccinia triticina)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PTTG_07763 T01547_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTTG_07763T0 CCCH ZF 358 384
PTTG_07763T0 CCCH ZF 396 422

Links

Other CCCH ZF family RBPs
Other Puccinia triticina RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.57.55.1 Melampsora laricis populina gw1.57.55.1 N 0.889
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.852
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.852
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.852
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.852
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.833
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.833
e_gw1.1.2331.1 Agaricus bisporus e_gw1.1.2331.1 N 0.833
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.833
0300010273 Ostreococcus tauri 0300010273 I 0.796
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.778
SPPG_04528 Spizellomyces punctatus SPPG_04528 N 0.778
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.778
fgenesh1_pg.C_scaffold_4000193 Sporobolomyces roseus fgenesh1_pg.C_scaffold_4000193 N 0.778
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.741
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.741
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.741
CMA121C Cyanidioschyzon merolae CMA121C N 0.722
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.704
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.704
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.704
fgenesh1_pg.scaffold_257000036 Physcomitrella patens fgenesh1_pg.scaffold_257000036 N 0.704
Zfp36l3 Rattus norvegicus ENSRNOG00000029788 I 0.704
DDB_G0285973 Dictyostelium discoideum DDB_G0285973 I 0.704
ECU01_0830 Encephalitozoon cuniculi ECU01_0830 N 0.704
au.g10607_t1 Chlamydomonas reinhardtii au.g10607_t1 N 0.704
estExt_fgeneshDP_kg.C_230001 Dictyostelium purpureum estExt_fgeneshDP_kg.C_230001 I 0.704
gw1.8.374.1 Chlorella NC64A gw1.8.374.1 N 0.704