GLRG_01727 (Colletotrichum graminicola)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 GLRG_01727 T01399_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GLRG_01727T0 CCCH ZF 59 83
GLRG_01727T0 CCCH ZF 88 111

Links

Other CCCH ZF family RBPs
Other Colletotrichum graminicola RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.980
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.980
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.980
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.960
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.960
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.959
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.959
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.940
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.939
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.939
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.939
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.939
NCU05007 Neurospora crassa NCU05007 N 0.939
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.920
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.900
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.900
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.898
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.765
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.745
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.735
orf19.7385 Candida albicans orf19.7385 N 0.735
ADR062W Ashbya gossypii ADR062W N 0.725
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.720
23616_YPL054W Saccharomyces paradoxus 23616_YPL054W N 0.720
LEE1 Saccharomyces cerevisiae YPL054W N 0.720
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.712
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.706
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.700
estExt_fgenesh1_pg.C_120231 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_120231 N 0.700
SPCC1739.01 Schizosaccharomyces pombe SPCC1739.01 N 0.700
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.700