estExt_Genewise1.C_60695 (Trichoderma atroviride)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_Genewise1.C_60695 T05118_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_60695 CCCH ZF 35 59
estExt_Genewise1.C_60695 CCCH ZF 63 87

Links

Other CCCH ZF family RBPs
Other Trichoderma atroviride RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.980
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.980
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.980
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.960
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.960
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.960
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.940
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.940
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.940
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.920
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.920
NCU05007 Neurospora crassa NCU05007 N 0.920
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.920
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.920
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.900
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.900
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.880
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.765
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.765
ADR062W Ashbya gossypii ADR062W N 0.725
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.725
orf19.7385 Candida albicans orf19.7385 N 0.720
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.720
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.720
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.712
LEE1 Saccharomyces cerevisiae YPL054W N 0.706
23616_YPL054W Saccharomyces paradoxus 23616_YPL054W N 0.706
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.700
SPCC1739.01 Schizosaccharomyces pombe SPCC1739.01 N 0.700
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.700
estExt_fgenesh1_pg.C_120231 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_120231 N 0.700