CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
HNRNPK
(
Pteropus vampyrus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSPVAG00000009078
T19406_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
0.947
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000008564
KH
1
52
NAGAVMGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI
ENSPVAP00000008564
KH
94
157
ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKII
ENSPVAP00000008564
KH
337
399
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
Links
Other
KH
family RBPs
Other
Pteropus vampyrus
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPK
Macropus eugenii
ENSMEUG00000006975
I
0.947
ENSMMUG00000018871
Macaca mulatta
ENSMMUG00000018871
I
0.947
HNRNPK
Gorilla gorilla
ENSGGOG00000015500
I
0.947
HNRNPK
Gallus gallus
ENSGALG00000012591
I
0.947
HNRNPK
Callithrix jacchus
ENSCJAG00000003750
I
0.947
hnRNPK
Homo sapiens
ENSG00000165119
D
0.947
ENSMODG00000008402
Monodelphis domestica
ENSMODG00000008402
I
0.947
HNRNPK
Monodelphis domestica
ENSMODG00000018992
I
0.947
ENSPPYG00000019327
Pongo pygmaeus
ENSPPYG00000019327
I
0.947
HNRNPK
Pan troglodytes
ENSPTRG00000021061
I
0.947
HNRNPK
Otolemur garnettii
ENSOGAG00000007478
I
0.947
HNRPK_RABIT
Oryctolagus cuniculus
ENSOCUG00000010364
I
0.947
Hnrnpk
Mus musculus
ENSMUSG00000021546
I
0.947
HNRNPK
Ornithorhynchus anatinus
ENSOANG00000014612
I
0.947
HNRNPK
Choloepus hoffmanni
ENSCHOG00000010832
I
0.947
HNRNPK
Equus caballus
ENSECAG00000025104
I
0.947
Ame_R002812
Ailuropoda melanoleuca
Ame_R002812
I
0.947
HNRNPK
Tarsius syrichta
ENSTSYG00000001196
I
0.947
HNRNPK
Taeniopygia guttata
ENSTGUG00000003138
I
0.947
Hnrnpk
Rattus norvegicus
ENSRNOG00000019113
I
0.947
HNRNPK
Echinops telfairi
ENSETEG00000016294
I
0.941
HNRPK_CHICK
Gallus gallus
ENSGALG00000014366
I
0.941
HNRNPK
Loxodonta africana
ENSLAFG00000026567
I
0.941
HNRNPK
Erinaceus europaeus
ENSEEUG00000014624
I
0.941
HNRNPK
Anolis carolinensis
ENSACAG00000001479
I
0.941
HNRNPK
Tursiops truncatus
ENSTTRG00000016693
I
0.941
HNRPK_BOVIN
Bos taurus
ENSBTAG00000021131
I
0.941
Gm7964
Mus musculus
ENSMUSG00000063902
I
0.931
ENSTTRG00000004906
Tursiops truncatus
ENSTTRG00000004906
I
0.931
XM_533511.2
Canis familiaris
ENSCAFG00000001399
I
0.926
HNRNPK
Tupaia belangeri
ENSTBEG00000001289
I
0.926
AAH44711
Xenopus laevis
AAH44711
I
0.920
AAB26047
Xenopus laevis
AAB26047
I
0.915
hnrpkl
Danio rerio
ENSDARG00000007034
I
0.915
XM_855974.1
Canis familiaris
ENSCAFG00000017503
I
0.910
HNRNPK
Felis catus
ENSFCAG00000014862
I
0.899
hnrnpk
Xenopus tropicalis
ENSXETG00000011722
I
0.894
HNRNPK
Takifugu rubripes
ENSTRUG00000000535
I
0.888
ENSPPYG00000013626
Pongo pygmaeus
ENSPPYG00000013626
I
0.883
HNRNPK
Gasterosteus aculeatus
ENSGACG00000007581
I
0.883
D3ZJL5_RAT
Rattus norvegicus
ENSRNOG00000029014
I
0.880
HNRNPK
Oryzias latipes
ENSORLG00000005161
I
0.878
ENSOCUG00000025925
Oryctolagus cuniculus
ENSOCUG00000025925
I
0.878
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000006005
I
0.862
HNRNPK
Takifugu rubripes
ENSTRUG00000010659
I
0.862
hnrnpk
Danio rerio
ENSDARG00000018914
I
0.851
ENSRNOG00000013016
Rattus norvegicus
ENSRNOG00000013016
I
0.824
HNRNPK
Oryzias latipes
ENSORLG00000004704
I
0.787
HNRNPK
Ochotona princeps
ENSOPRG00000015723
I
0.771
HNRNPK
Procavia capensis
ENSPCAG00000016196
I
0.771
ENSCPOG00000005024
Cavia porcellus
ENSCPOG00000005024
I
0.750
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000007554
I
0.745