hnrnpk (Danio rerio)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDARG00000018914 T18617_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
hnRNPK
M026_0.6 		Homo sapiens CCAWMCC RNAcompete
Ray et al.(2013)
RNCMPT00026 		0.904
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000022922 KH 44 104
ENSDARP00000022922 KH 122 185
ENSDARP00000022922 KH 343 403
ENSDARP00000088690 KH 3 63
ENSDARP00000088690 KH 81 144
ENSDARP00000088690 KH 302 364
ENSDARP00000088691 KH 3 63
ENSDARP00000088691 KH 81 144
ENSDARP00000088691 KH 314 376

Links

Other KH family RBPs
Other Danio rerio RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPK Gasterosteus aculeatus ENSGACG00000007581 I 0.931
HNRNPK Oryzias latipes ENSORLG00000005161 I 0.926
hnrpkl Danio rerio ENSDARG00000007034 I 0.920
HNRNPK Tetraodon nigroviridis ENSTNIG00000006005 I 0.915
HNRNPK Takifugu rubripes ENSTRUG00000010659 I 0.915
HNRNPK Tursiops truncatus ENSTTRG00000016693 I 0.910
HNRPK_BOVIN Bos taurus ENSBTAG00000021131 I 0.910
Hnrnpk Rattus norvegicus ENSRNOG00000019113 I 0.904
HNRNPK Otolemur garnettii ENSOGAG00000007478 I 0.904
HNRNPK Pan troglodytes ENSPTRG00000021061 I 0.904
HNRNPK Tarsius syrichta ENSTSYG00000001196 I 0.904
HNRNPK Callithrix jacchus ENSCJAG00000003750 I 0.904
HNRNPK Choloepus hoffmanni ENSCHOG00000010832 I 0.904
Ame_R002812 Ailuropoda melanoleuca Ame_R002812 I 0.904
HNRPK_RABIT Oryctolagus cuniculus ENSOCUG00000010364 I 0.904
HNRNPK Taeniopygia guttata ENSTGUG00000003138 I 0.904
ENSPPYG00000019327 Pongo pygmaeus ENSPPYG00000019327 I 0.904
HNRNPK Loxodonta africana ENSLAFG00000026567 I 0.904
ENSMMUG00000018871 Macaca mulatta ENSMMUG00000018871 I 0.904
ENSMODG00000008402 Monodelphis domestica ENSMODG00000008402 I 0.904
HNRNPK Ornithorhynchus anatinus ENSOANG00000014612 I 0.904
HNRNPK Gorilla gorilla ENSGGOG00000015500 I 0.904
hnRNPK Homo sapiens ENSG00000165119 D 0.904
HNRNPK Gallus gallus ENSGALG00000012591 I 0.904
HNRNPK Monodelphis domestica ENSMODG00000018992 I 0.904
HNRNPK Macropus eugenii ENSMEUG00000006975 I 0.904
Hnrnpk Mus musculus ENSMUSG00000021546 I 0.904
HNRNPK Equus caballus ENSECAG00000025104 I 0.904
HNRNPK Takifugu rubripes ENSTRUG00000000535 I 0.899
ENSTTRG00000004906 Tursiops truncatus ENSTTRG00000004906 I 0.899
HNRNPK Anolis carolinensis ENSACAG00000001479 I 0.899
HNRNPK Echinops telfairi ENSETEG00000016294 I 0.899
HNRPK_CHICK Gallus gallus ENSGALG00000014366 I 0.899
HNRNPK Erinaceus europaeus ENSEEUG00000014624 I 0.899
AAH44711 Xenopus laevis AAH44711 I 0.894
Gm7964 Mus musculus ENSMUSG00000063902 I 0.894
XM_533511.2 Canis familiaris ENSCAFG00000001399 I 0.888
AAB26047 Xenopus laevis AAB26047 I 0.883
HNRNPK Tupaia belangeri ENSTBEG00000001289 I 0.883
hnrnpk Xenopus tropicalis ENSXETG00000011722 I 0.872
XM_855974.1 Canis familiaris ENSCAFG00000017503 I 0.867
HNRNPK Felis catus ENSFCAG00000014862 I 0.856
HNRNPK Pteropus vampyrus ENSPVAG00000009078 I 0.851
ENSPPYG00000013626 Pongo pygmaeus ENSPPYG00000013626 I 0.846
ENSOCUG00000025925 Oryctolagus cuniculus ENSOCUG00000025925 I 0.835
D3ZJL5_RAT Rattus norvegicus ENSRNOG00000029014 I 0.798
HNRNPK Oryzias latipes ENSORLG00000004704 I 0.793
ENSRNOG00000013016 Rattus norvegicus ENSRNOG00000013016 I 0.782
HNRNPK Tetraodon nigroviridis ENSTNIG00000007554 I 0.761
HNRNPK Procavia capensis ENSPCAG00000016196 I 0.761
HNRNPK Ochotona princeps ENSOPRG00000015723 I 0.761
ENSCPOG00000005024 Cavia porcellus ENSCPOG00000005024 I 0.750